AMCG00013584


Basic Information

Item Value
gene id AMCG00013584
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 37071514 ~ 37074315 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013584
ATGGCAGCCGCAAGATGGGACTCTCCCATTGAGGGAGAGGATAAAGACACCCCAGCTGTTCAGACACTAAGCTCTGAACTCATCTCATGCCCGGCTGAATCTGCCAGTGAGGTGCAGCCATGCTCAGAGCTGCCGCAGGACAGTGGAAAATCAAAACCATCCTCCACTGGGACAGAAAGGACCCTCAGCTCTTTTTGGAAAAGCAGTGGACTTGGCAAAGTAATGAGtgtgagaaaaaagaaagagaaaccatTGGGGAGTGTGGAAACACGTGGGGAACCAGAGGAGAAAAAGAGATCTCTGACTCATGGCCAGCCATCACCAACAGAAGACTTCCTGCTTATCTCTAGTCCTAACGAATTAGGTTCCAAGCAGTCTTCTGATGTGGAAGCTCCCAGCTTCACTGACCAATTTGAGGATAAGAGCCAGGTTGAGAAAAGGCAGGAGACAGCAGAGGCCCCGCTGCAGGAGAATCCAGTAAGCCCAGGAAATGAGGCTAAACCAAGACAGTCAGAGAAACAGAGTGTCCGGGGTTTCATTCGGAGACCCGTCTCTAAGATGTTCTCGCACAAAGGCATAGAGAAAAGAGAAGAGGTTCCTCCCAAGGAAAGCATAGCTGAAGCATCAAAAGATTCTGGGAAGACTCGTTCAAGATCTCTGGATAGACTGCTGGACTCAGAAATCTGTGATGCTGTGGTGGACCAAGGAAGTGCACCAGGAATTGAAGGAGAACCACACAAGTCAACTCATCATGGATCAGGGCACATGAAACGCTGGCAGTCTTTTAAAAAGCTGATAGGTCAAAAGGCGCTCAAGAAGGGCACAGACAACCTCAAGGGCCAGGAAGGAACAGGGGATAACATCGCTGATGGGAAAGCAGAAGCCACTGGAGGAGAGACTTTAGGGACCAATATCCAGACAGATATGGCAGGACAAAAGAAACGCAGGATAAAAAGATCATGGACATTTCAGGGGCTGAAGAGAGATCAGTCTTTCACAGACAGCCACTTCCACAAGGAAGTCAAAGAAAACCCCTGTGGTCCTCCACAAGGAGGAGAAGGTCATGCAGAAGCTGAACAAGGTGTAGTAGTGTCAGTGGAGGATTCCAAGACTTCAAGTgctggaggagaagaaaagacaCCAGGGACAGAACATCCAGAGCAAGAAGAAGAGAAAGGGTCATCCACACATGGCCTCCCAAAATCAATAGACCATCAAGCTCATGAAGTCTGgagatcatttaaaaatctaGTCATCCAAAAGTCGAAGAGGACCACAGATGCTGcaagagaggagggggaggtggtCAGTTCAGCAACTGATGAGCAGAACAGTCAAGACCTGCACAGACCTACAAGGCAACAGTCTAAAAGGGCTCCCTTCAATAGAGCCGTGTCCCTCAAAAAGTTCATTCTTCGCAAAGGGAAGAGTAAAAGTATAGACCTGGGGGAATCTCCAGAGTTaccaaaagaagaaaatacacagaGCGTAAATTCCACCCCTGCTGAAGTCATTGAGGAATGTGGAATACAAAGCCAACCAAGTGGACATGACTCGGGCTCTGTGGATGATGATTCTGAGGGCATCAGGGATAGGGACAATAGTGTAGATCTTGAGAATATAGATGAGTCCACGGCACAAGGAAGCATTTCCGAATCAGTGGTTGCTTCACACTGTGGGGAAGATAACCAAGGAGAGGGACAAATTGTAAGCATACATGCAGATGTAGATGACAGTGTTCAAGATGATGCACAGGAAAATGCTGACCGATCCATAGCCCAGGACCCAGAATCTGATCAGAGAGATCAGACTGCAGACAACAATCTTGAGGAAAACTCACATGGTGAATCACAAGGGGAAGGAAAAAGTGGTGATTCTGAAAGCCCAATTCAAGGACACCCTGTGTCTGCAGACATATCCAGTGAAGTAATATCCAAGGACACAGAAATGGATGCTTCCAAAAGTCTCCATGAAACACCATCAGGACTACAGCAGGAATGTGAGGTGCTGTACAGAGAAGATGATGCAGTACAGACTGGATGTTCTCAACAGTCATCAGTCAGAAGTGTAGACGAGTCCAAAGATGATGCTGGGACTGAAATTGGCACTGTTGAACAAGATGGAGAAGAAAATCAGACTGCACAAGAAATAAGTGAAATGTCTCCACAGGTAGAAATCCAAACACAGGAAGAAGCCAGACCAGAGGGCACCCTTTCCCAGAATGATATGCCTTGCTTAGGTGATGCCACAGCTGAGATTAACCTAAACAGTGACCCACCTGTCCAGACTGGCAAGCCTGCAGGAGAACCGAAAGCAGAACAAGGAGAGATTCCAGACATGGATTGTACTGAAACTGCCCCTTGCAACCACTCTGAGGAGACAATAGTGGCTGATGTCCAATATGCTGGACAGATGTGCTCTTCTGCAGAAGACCCCACTCTTTGTGAAGGTGGGAAAGTAAGCAGTGCccaagaaacagaaacagaaaatctgAGCCACTTGAAACACTCCAGGGACCAAGACATCAGCTTTAAAGGCCAGTCCAGTGGCGATGATGCCCATCCCAATGGAGGGTCAGATCCTGCTTCAGAAGAGGCACCATCTGTCCTTGTTGATCCAGGGGATGAGCAGAAGAGAATATTTTATGAGGCAGCTGCTGCCATTGTCCGAACAGTGGTGAGTGCAGCCACAGAGCAGATCACCAAGGAGCAAGACATCTTAGACAGTGGGTTCAATGGCTCCTACCCcaacaacaatgacaatgcCAACTACCAGGATCTTGATCTCCATTACTGCCACTGA

Function

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013584 True 2802 mRNA 0.48 1 37071514 37074315

Neighbor

gene id symbol gene type direction distance location
AMCG00013581 NA coding upstream 14738 37047933 ~ 37056776 (+)
AMCG00013582 NA coding upstream 37040 37018451 ~ 37034474 (+)
AMCG00013583 clip3,LOC106612689,LOC106580752 coding upstream 58118 36977272 ~ 37013396 (+)
AMCG00013575 NA coding upstream 210717 36843528 ~ 36860797 (+)
AMCG00013576 NA coding upstream 261063 36806758 ~ 36810451 (+)
AMCG00013589 capns1,LOC102233422,LOC105011036,LOC105909712 coding downstream 27371 37101686 ~ 37105980 (+)
AMCG00013586 NA coding downstream 54703 37129018 ~ 37133189 (+)
AMCG00013588 ckma,LOC101077669,LOC103045415,LOC103141037 coding downstream 79952 37154267 ~ 37170647 (+)
AMCG00013593 NA coding downstream 152341 37226656 ~ 37228647 (+)
AMCG00013598 NA coding downstream 278967 37353282 ~ 37393858 (+)
G45499 NA non-coding upstream 7250 37063957 ~ 37064264 (+)
G45408 NA non-coding upstream 287894 36782569 ~ 36783620 (+)
G45405 NA non-coding upstream 341558 36727950 ~ 36729956 (+)
G45403 NA non-coding upstream 351525 36719652 ~ 36719989 (+)
G45397 NA non-coding upstream 366621 36704652 ~ 36704893 (+)
G45538 NA non-coding downstream 176886 37251201 ~ 37290765 (+)
G45737 NA non-coding downstream 802068 37876383 ~ 37932198 (+)
G45805 NA non-coding downstream 998940 38073255 ~ 38073852 (+)
G45812 NA non-coding downstream 1023675 38097990 ~ 38098531 (+)
G45854 NA non-coding downstream 1136775 38211090 ~ 38212886 (+)
G45439 NA other upstream 193911 36874907 ~ 36877603 (+)
G45406 nova2,LOC103039352,LOC103141028,LOC107669728,LOC107089881,LOC107548550 other upstream 333035 36736677 ~ 36738479 (+)
AMCG00013571 eml2,LOC107757343,LOC107685092,LOC106530730 other upstream 425448 36620402 ~ 36646066 (+)
G45338 NA other upstream 667613 36403354 ~ 36403901 (+)
AMCG00013566 NA other upstream 701427 36338262 ~ 36370087 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other downstream 37453 37111768 ~ 37122611 (+)
AMCG00013595 NA other downstream 240898 37315213 ~ 37327711 (+)
AMCG00013616 ccdc9 other downstream 730892 37805207 ~ 37817764 (+)
AMCG00013618 NA other downstream 744056 37818371 ~ 37821575 (+)
AMCG00013629 hnrnpl2,LOC105006371 other downstream 980582 38054897 ~ 38069645 (+)

Expression


Co-expression Network