AMCG00013593


Basic Information

Item Value
gene id AMCG00013593
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 37226656 ~ 37228647 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013593
ATGGACACCATTAACTGCCAGGAGAAGAAGCTCTTGCAAATCCCCCGCTTGCCAGACACGGTGAAAAATCTCTTAGCCCAGCGCAACAACATCCAAGCTCTGCCCTCTGATGGTATGGAGGAACTCCGTTTGTTGGACCTGACTGAGAACAAGGTCAACCTCTCCGCTCACTCCACCCTGCCAGTCATGAGGAATCTTGGTCAGCTCTACTTAAGAAAAAACAGCCTGACTGCACTGCCTGCTGGTCTGCTGCAGAACCTCTCCAATCTGACTGATCTGGACATCAGTGACAACCGACTCACCTCCTTGCCTCCTGGGCTTCTCGTAGGTCTGCGAAGTTTGTCGATCCTCATCCTCAGCTTGAACCAGATCCAGATCCTGGAGAAAGGGGCCCTGGAGGGGACCCCAGCTCTTACTGTGCTACATCTGAGCAGCAATGCCCTTGAGGAGCTGGAAACTGAAGTCTTCTACAGCTCTAGGAACCTGAAGCAACTTGTCCTGTCCAACAATAATCTCAGGAGTTTAGGGAACGGCTCCCTCGCTGGTGCTACAAGCCTTAGGGTGCTGGATCTGAGCAGTAACAAATTGCAGGCTGTGCCCAAGGCTGCCCTCCGAGATATCCCTCAGCTCAGGAGGCTCTTGCTTCAAAAGAACCAGATCCCAAGCCTTTCTGATGACGATTTCTCTGGGCTAAGGGAGTTGCATTTGCTGGACCTAAGCAGCAACCGCATAAACTCCATCACAGATGATGCTTTGAGAGGTTTGACCCAGCTAAAGAAGCTGGATATAAGCTTCAACAGAATACAGTTTCTGCCTTCCATTATGTTCCAAGATTTAGGTAACCTTGAAGCCCTGTACCTCTACAACAATGAGCTGAGTAGCCTGCCTGCAAACAGCTTTCAGAGACTAGTTGTCTTAAAGGAGCTCCACCTTGACAGCAACCAGATCTCCCATCTACCCGTCGATGCCTTCCAAGGAGCTGCAAACCTCAGGGAGCTTCAGCTTGACAACAACAAACTCACATACCTTCCCCCACAGCTGTTCCATAACCTTACAGAGCTCAGGTCCCTCTCCCTTGACAACAATGCTTTGTCCAAGATCCCGGACACCCTTTTCCATAGCATCCATAGCCTCAGGGAGCTGCAACTGGAGCACAACTTCCTCGAGTCCATCCCTGCCTCGGCCTTCAGTGACCTGACCAGTCTGCGGACCCTTTCACTCCATCACAACCACCTCTCTGAGCTGTTCCCTACTTTGTTTGCCGACCTGAAGAAACTGAGGGAGCTGGAGCTCAATGAGAACCAAATTGAAAGGATCCCAGTTGGACTCTTCAAGGGGCTGAAAAGCCTGAAGAAGCTTCACCTGGACAGCAACCGGTTGGCATCCCTGTCCCCAGGAGACCTGACTGAATTGCTCAACCTCCAGGAGCTGCATATGAGCCACAACCACCTCTCTGTGCTCCCTCCTAACGTCTTCCGCAGCCAGAGCAGCCTCAGGAAGCTCCTGCTCCACAAGAACAAGCTGGTCTCACTACTCCCAGGTGTCTTCTCCTCCCTGGTGAATCTGAAGGACCTGGACTTAGAAAATAACCAGCTGCAACATCTGGCCCCTGAGATCTTCCAAGATCTCGGGCAGCTCCAGGTACTGTTTCTCAAGTATAACCGCCTGAAGCACCTCACCAACAGCACCCTGTCCTCGCTACGCTCTCTGAAGGAGATCTACCTGGATGGAAACCCCTGGGATTGCTCCTGCTCTTCCATCTTCTACCTCAGCCACTGGACTCACACTCACACCAAAATCCTGCAGGATGACCCTAAGTGCTCCACCCATGAGATGCCCCTGTCCAAAGCTGCCTTGCCACCACATGTTTTGTCCTCCCAGTGCTCGGGGGCCACGTCCTACAATGGCCTAAGAAGTGTTCTATTCCAAACCCTGGTAGCACTCTGTGCTATGTTTTGTGCCTTGCTTTTCTGTTCCCACAGTTGCTTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013593 True 1992 mRNA 0.52 1 37226656 37228647

Neighbor

gene id symbol gene type direction distance location
AMCG00013588 ckma,LOC101077669,LOC103045415,LOC103141037 coding upstream 56009 37154267 ~ 37170647 (+)
AMCG00013586 NA coding upstream 93467 37129018 ~ 37133189 (+)
AMCG00013589 capns1,LOC102233422,LOC105011036,LOC105909712 coding upstream 120676 37101686 ~ 37105980 (+)
AMCG00013584 NA coding upstream 152341 37071514 ~ 37074315 (+)
AMCG00013581 NA coding upstream 169880 37047933 ~ 37056776 (+)
AMCG00013598 NA coding downstream 124635 37353282 ~ 37393858 (+)
AMCG00013600 NA coding downstream 177644 37406291 ~ 37411449 (+)
AMCG00013601 supt5h,LOC107662786,LOC107597543,LOC107657557,LOC107586261 coding downstream 183019 37411666 ~ 37486810 (+)
AMCG00013599 supt5h,LOC106580766 coding downstream 258541 37487188 ~ 37518978 (+)
AMCG00013602 timm50 coding downstream 345703 37574350 ~ 37581432 (+)
G45499 NA non-coding upstream 162392 37063957 ~ 37064264 (+)
G45408 NA non-coding upstream 443036 36782569 ~ 36783620 (+)
G45405 NA non-coding upstream 496700 36727950 ~ 36729956 (+)
G45403 NA non-coding upstream 506667 36719652 ~ 36719989 (+)
G45397 NA non-coding upstream 521763 36704652 ~ 36704893 (+)
G45538 NA non-coding downstream 22554 37251201 ~ 37290765 (+)
G45737 NA non-coding downstream 647736 37876383 ~ 37932198 (+)
G45805 NA non-coding downstream 844608 38073255 ~ 38073852 (+)
G45812 NA non-coding downstream 869343 38097990 ~ 38098531 (+)
G45854 NA non-coding downstream 982443 38211090 ~ 38212886 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other upstream 104045 37111768 ~ 37122611 (+)
G45439 NA other upstream 349053 36874907 ~ 36877603 (+)
G45406 nova2,LOC103039352,LOC103141028,LOC107669728,LOC107089881,LOC107548550 other upstream 488177 36736677 ~ 36738479 (+)
AMCG00013571 eml2,LOC107757343,LOC107685092,LOC106530730 other upstream 580590 36620402 ~ 36646066 (+)
G45338 NA other upstream 822755 36403354 ~ 36403901 (+)
AMCG00013595 NA other downstream 86566 37315213 ~ 37327711 (+)
AMCG00013616 ccdc9 other downstream 576560 37805207 ~ 37817764 (+)
AMCG00013618 NA other downstream 589724 37818371 ~ 37821575 (+)
AMCG00013629 hnrnpl2,LOC105006371 other downstream 826250 38054897 ~ 38069645 (+)
G45850 NA other downstream 1001919 38230566 ~ 38231330 (+)

Expression


Co-expression Network