AMCG00013600


Basic Information

Item Value
gene id AMCG00013600
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 37406291 ~ 37411449 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013600
ATGGGATGTGCGCTGTCAGGGTCTGGGTTGAATTCGGGAAAATCTGCCCCCGACCTGAACGGGTCCAGGTCCGAGTGTCCTGCGGAGTCCAGTTTGCTCCACCAGTCGGAACCAGCAGGTGAAAACGGCACCGGCTCCCGAACGACATCCCAAGCAAACCCCTTGACCGACTCCCAGAAAGACCTGATCCGTGAGTCCTGGACCATTTTGCATCAGGATATCGCCCGCGTCGgaataatcatgttcataagGGTGATGTCCTTCATCGAGAAAAGCGTAGCTCGCTTATCCCAGGACGACAAACTGGAGCAGATTGCCTTTGAGCTGGGAAAGAGTCACTGTCGTTACAATGCCCCCCCAAAATACTACGAGtaTGTGGGGGTGCAGTTCATCAGCGCGATCAAGCCCATCCTAAAGGAGAGCTGGAGCCCACAGGTGGAAGAAGCCTGGGAGagCTTATTTGCATACCTGGCAGCTGTGATGAAAAGAGGCTACCAGGAGGAGGAGCGGAAGAATGGTGTGAACAAGACCAACTACGCCaggaagcagcagcagccctcCTCCAGAACAGACGATGGCACGACTCCCAATAACATCTGA

Function

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013600 True 600 mRNA 0.54 4 37406291 37411449

Neighbor

gene id symbol gene type direction distance location
AMCG00013598 NA coding upstream 12433 37353282 ~ 37393858 (+)
AMCG00013593 NA coding upstream 177644 37226656 ~ 37228647 (+)
AMCG00013588 ckma,LOC101077669,LOC103045415,LOC103141037 coding upstream 235644 37154267 ~ 37170647 (+)
AMCG00013586 NA coding upstream 273102 37129018 ~ 37133189 (+)
AMCG00013589 capns1,LOC102233422,LOC105011036,LOC105909712 coding upstream 300311 37101686 ~ 37105980 (+)
AMCG00013601 supt5h,LOC107662786,LOC107597543,LOC107657557,LOC107586261 coding downstream 217 37411666 ~ 37486810 (+)
AMCG00013599 supt5h,LOC106580766 coding downstream 75739 37487188 ~ 37518978 (+)
AMCG00013602 timm50 coding downstream 162901 37574350 ~ 37581432 (+)
AMCG00013604 NA coding downstream 183623 37595072 ~ 37602985 (+)
AMCG00013605 NA coding downstream 248948 37660397 ~ 37666944 (+)
G45538 NA non-coding upstream 115526 37251201 ~ 37290765 (+)
G45499 NA non-coding upstream 342027 37063957 ~ 37064264 (+)
G45408 NA non-coding upstream 622671 36782569 ~ 36783620 (+)
G45405 NA non-coding upstream 676335 36727950 ~ 36729956 (+)
G45403 NA non-coding upstream 686302 36719652 ~ 36719989 (+)
G45737 NA non-coding downstream 464934 37876383 ~ 37932198 (+)
G45805 NA non-coding downstream 661806 38073255 ~ 38073852 (+)
G45812 NA non-coding downstream 686541 38097990 ~ 38098531 (+)
G45854 NA non-coding downstream 799641 38211090 ~ 38212886 (+)
G45860 NA non-coding downstream 827090 38238539 ~ 38243152 (+)
AMCG00013595 NA other upstream 78580 37315213 ~ 37327711 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other upstream 283680 37111768 ~ 37122611 (+)
G45439 NA other upstream 528688 36874907 ~ 36877603 (+)
G45406 nova2,LOC103039352,LOC103141028,LOC107669728,LOC107089881,LOC107548550 other upstream 667812 36736677 ~ 36738479 (+)
AMCG00013571 eml2,LOC107757343,LOC107685092,LOC106530730 other upstream 760225 36620402 ~ 36646066 (+)
AMCG00013616 ccdc9 other downstream 393758 37805207 ~ 37817764 (+)
AMCG00013618 NA other downstream 406922 37818371 ~ 37821575 (+)
AMCG00013629 hnrnpl2,LOC105006371 other downstream 643448 38054897 ~ 38069645 (+)
G45850 NA other downstream 819117 38230566 ~ 38231330 (+)
G45894 NA other downstream 959207 38370656 ~ 38373198 (+)

Expression


Co-expression Network