AMCG00013603


Basic Information

Item Value
gene id AMCG00013603
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 37676708 ~ 37683789 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013603
agtctctctgtccctctgtatctctgtctgtctgtctgtctgtgtagcAAGATGCTCGATTCAGAAGGCACGCTGGACCACAGGCGCCTGCCACGTATGGCTGCCTCTCTGAACCTCGGGATCTCTGTCAAGGAGCCCCCCACAGACACATCCGAGACACCGCTGTCCCTGCCACCCCTTGCTCCCGCCCTTTCCCCCATCACTGTGCCTGACTACGAGCTTGTATGCCAAACGCCCCCCTACCCCGACACCCCAGACCTGTCTCCCGACCCCAGTGTTGCTCCGGCTTGGGGGTCCTCAGGTTCTGACATCCCATACCGAAAGGGGGTGGAAGAGAGCGCAGAGGAGATAggtgagggagaggaagaagacAAAGAGGGGGAGgagcagaagaagaagcaggaagaggaagaggggcaGGATGCCCATGTGAGGGGGGGAGACCCAGGGGATGGCAAACCCTCTTCAGTGACAGTGGAGAACAGCCCCAAGAAAAAAAGGACCTGTGTCGATGCAGAGTACAATATCTGCCACCTGATGCGTTCGGCGACCGTGTGCAGCGAGTTGTTCGACCGGCTGCTGCAGGACTGCCCCCAGTTCCACGACTGCAAGAGCTGCCTGGCTGCcttcctgctggagaaagAAGTTGTGGACACCGCTGGGCTGGCTTTTGAGAGGTACCAGGTGGTGGCCTTTGGCACAGGGGAGTCCTGCTGCTCGGGATGGCTGGGCTTCACAGGGCGCATTGTTCACGACTGCCACGCCCTTGTTCTACTGTTCTACAGCGAAGATCAGGAGAAGTCCATTTACAAGAGGTCCCCGGACAGTGAGCTCCTGCAGCTGAAGCCAGGCATCTATCTGCACCTGTACACCAACCAGACTCCCAAAGGGGCGGCCCAGTGCATTCTCATgAGGATGTCCAGCAACAATTACACCTCCCTGAAGCTGCAGTGCCACACCAAGGGCTCCCTCATCCCCGCCTCCTTCCAGCCGCCCAGTGTGTGGGCCTCGCGCATCTGCTGCATGTCTGACAGCGACAAGCTGACCCGGTGGGCCGTGCTGGGGGTGCAGGGGGCGCTGCTCAGCTATTTCATCAACCCCCTCTACATCGTCAGCGTCGTGCTGGGAGATTACAGCCACAGTGTAGAAAAAGTGTCAGACGTGATAAACGAGCGTCTAGGGCAGGGCTGGCATAGTCAGCTGCCCCCCCCCTTTGAGAAGCGGGAGATGTACATTTTCGGTGGGGCCAACGTTGGCCCGTTAGCCAGCCCACCTGAGTACAAGGACCTAAGCCTCAACTGGTGCCTGGGAGATGTGGGTGTGGAGATCATTGACAGCACCACTGGCCGCGCCATTGAAGAgtctCCCTTCACCAGCGGCCCGTGCCTGTCCAGCCGGTTGTGTAAGGCAGCTTTCCTCAGTGCATTCAGGGCCGTGAAGGCCAAGCTCTACCAGGAGGCGAAGGCAGTGGTCAGGGCACAGTTTGTGAGCAACAACGTGGGGACCTGGAACTCCAAGAACATCGTGGACAGCTTCAGTGACTGATCTGCTCTGCCAGGCAAGACTCATTTAGGGaatgttctgtttcttttaattcattttttgctGCATTACTGTTGTACTGAAACTTGTCAGTTGGTTTTTAAGTTAACAACCGTTGGCGTGTGGGCCTGGTGTGAATTTATTATGGtatgctttattaaatatagaAGGAGTAAAACACCATTAAATTATAGTGTTTACATTGCAATGCAGAATAATAGTAGTTGATTTATGCTGCAGGCTTCACAATCTCCTTACATTGCCTTGGCTCCTAGTTTTCTATGTAGTGTATGCTGTGAGGctagatttaatttgtgactcAGTTAATGCAGATTTCTTATGATCATTttgacaattttattttgttgcatttcagcataaatgttttaattgaaggGATTATTAACCATAGAAATGGCCTGTTACAAATCtttggaaaattgaaaatatttggcatgtttatttcttctatatattacagatttctatatagatttttttctctgtgtatatagttatatattcaATGTAAAATGATACATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013603 True 2086 mRNA 0.52 8 37676708 37683789

Neighbor

gene id symbol gene type direction distance location
AMCG00013606 NA coding upstream 749 37671106 ~ 37675959 (+)
AMCG00013605 NA coding upstream 9764 37660397 ~ 37666944 (+)
AMCG00013604 NA coding upstream 73723 37595072 ~ 37602985 (+)
AMCG00013602 timm50 coding upstream 95276 37574350 ~ 37581432 (+)
AMCG00013599 supt5h,LOC106580766 coding upstream 157730 37487188 ~ 37518978 (+)
AMCG00013612 NA coding downstream 29959 37713748 ~ 37714896 (+)
AMCG00013609 LOC107382997,LOC102784118 coding downstream 82202 37765991 ~ 37777845 (+)
AMCG00013614 pak4,LOC103368331 coding downstream 161644 37845433 ~ 37852929 (+)
AMCG00013615 NA coding downstream 176600 37860389 ~ 37867034 (+)
AMCG00013613 NA coding downstream 189045 37872834 ~ 37876087 (+)
G45538 NA non-coding upstream 385943 37251201 ~ 37290765 (+)
G45499 NA non-coding upstream 612444 37063957 ~ 37064264 (+)
G45408 NA non-coding upstream 893088 36782569 ~ 36783620 (+)
G45405 NA non-coding upstream 946752 36727950 ~ 36729956 (+)
G45403 NA non-coding upstream 956719 36719652 ~ 36719989 (+)
G45737 NA non-coding downstream 192594 37876383 ~ 37932198 (+)
G45805 NA non-coding downstream 389466 38073255 ~ 38073852 (+)
G45812 NA non-coding downstream 414201 38097990 ~ 38098531 (+)
G45854 NA non-coding downstream 527301 38211090 ~ 38212886 (+)
G45860 NA non-coding downstream 554750 38238539 ~ 38243152 (+)
AMCG00013595 NA other upstream 348997 37315213 ~ 37327711 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other upstream 554097 37111768 ~ 37122611 (+)
G45439 NA other upstream 799105 36874907 ~ 36877603 (+)
G45406 nova2,LOC103039352,LOC103141028,LOC107669728,LOC107089881,LOC107548550 other upstream 938229 36736677 ~ 36738479 (+)
AMCG00013571 eml2,LOC107757343,LOC107685092,LOC106530730 other upstream 1030642 36620402 ~ 36646066 (+)
AMCG00013616 ccdc9 other downstream 121418 37805207 ~ 37817764 (+)
AMCG00013618 NA other downstream 134582 37818371 ~ 37821575 (+)
AMCG00013629 hnrnpl2,LOC105006371 other downstream 371108 38054897 ~ 38069645 (+)
G45850 NA other downstream 546777 38230566 ~ 38231330 (+)
G45894 NA other downstream 686867 38370656 ~ 38373198 (+)

Expression


Co-expression Network