AMCG00013604


Basic Information

Item Value
gene id AMCG00013604
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 37595072 ~ 37602985 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013604
CAAACGTCCAACAACCTGCAGCAAGGGAGCGTAGGGAGATAAGTGTCCCGTAACATATTTGAATTTAGGGATTTGCTTTTTGGGaagtttttttcccttccttttttccttttccttttcttcctttgGTATTGGGGATACACGAACATACCTGGACACTTACTGGATATCAATTATCTGTCTGCTCTTGATAGCGGACCAAGAAGACGCAACATGGCTTTACCtctgttagtttgttttttggccTTGATATCAACGCATTTGGTACAGTCTTCCGGTATGTTTGAGTTGAAGGTGCACTCCTTCAGCACTGCCCGCAGCATTTGTCGCAAATCAAGAGACTGCCAGATCTTTTTCCGAGTCTGTCTCAAACATTCCCAGGACATCATCTCTCCCGAACCACCGTGCACCTATGGCACCGGAGTCACGGATATATTTCGCTCTGATCAAGGAGCCATCTCCAGAAGCGCTCCCATTCGCGTACCTTTCCATTTTAAGTGGCCGGGAACGTTTTCACTCATTATCGAAGCCTGGAACGCAGAATCCTCCGAACAATCCACAGATAACCCTGTGAACCTGATCAGTCGTTTGGCGATGCGCAGAAGACTGGCCGTGGGAGAGGACTGGTCGCAGGACGTGCACAACTCCGGGGAACAGCAGAGCGACATTCGCTACTCCTACCACGTCGTGTGCGATGAGCATTACTACGGGGACAGCTGCTCAGACTACTGCCGGCCAAGGAACGACACCTTCGGGCACTTCACCTGCGATGACGCCGGCAACCGAGCCTGTCTGTCTGGCTGGAGTGGAGAGTACTGCTCTGAACCCATCTGCCTGTCTGGCTGCAGCGACAAGCATGGCTACTGCGAGTTCCCTGGCGAGTGCAAGTGCCGCCTGGGGTGGCAGGGACGCCTGTGCGACGAGTGTGTGCGCTACCCCGGATGTTTGCATGGGACCTGCGGCCAGCCCTGGCAGTGCAACTGTCAGGAGGGATGGGGCGGCCTATTCTGCAACCAGGACCTCAATTACTGCACCAACCACCGGCCCTGCCTCAACGATGCCACCTGCACCAACACGGGTCAGGGGAGTTACACCTGCACCTGCCGCCCGGGCTTCAGCGGCACCAAGTGTGAGATTGAGACCAACGAATGTGCCAGTAACCCATGCAAGAATGGAGGCAGCTGCAAtGACCTGGAGAATGATTACTCTTGCACCTGCCCTCAAGGATTCTACGGCAAAAACTGCGAAATCAGTGCCATGACATGTGCCGATGGGCCCTGCTTTAACGGGGGCACCTGCGTGGAGAAGAGTGGCTACTGCTTGGATGTGGGCAACAGCAAACTGTGCCGCTGCCGGCCGGGCTTCACGGGCCTCAACTGCGAGATCAATGTGGATGACTGTGCCCGCAACCCCTGCCGCAACGGGGGGACCTGTGTGGACGGCGCCAACGACTACACCTGCACCTGCACCCTGGGCTACACAGGCAAGGATTGCAGCATCCGTTCAGACGCCTGCAGTGCCTTCCCCTGCCAGAATGGCGGCACCTGCTATACCCACTTCACAGGCCCTGTGTGCCAGTGCCCCTCGGGGTACATGGGCTCTCGCTGCGAGTTCAGCCTCACGCCCACCGTCTCTACAAATCCGCCGATCAAGCCGATCCCTGTGGCCCTGGCCATCTCCTTCGCCCTGGGCCTGGTTACCCTTCTGCTGGTAGTCTGCGCCACCGTCATTGTGCTGCGGCAGATGAGGCAGAGCAAGAAGGGGTTGGGCAAAGCCGTGCGCAATGACCTGGAGCCCATCAACAACCTCTCACACTACCCCCGGGAGAAGGAGGCCTTTCTCATTCCCGGAGGGCACTACAAGGTCACCAACAAGGACGTTGAGTTCAACGGTGACAGCATCGGGGACAAGGCTGGGTACAAACAGAAACTCATGGACTACAACCTGGCTGAGGATGAGGCGCCGCTCACCAAAAAGAAGTTCGACCTaaaaaaatCCGAACACATCATCTCTGTTCCTCCACTGAGCTTCCCAAAAGATGGCCTTTATCACCCAGTGTACATCATTCCAGAGCAGATGGAGCAGTGCGTCTTTGCTACTGAGGTTTAACAACAGTATTCCGGACTGTGGTGCAGCTCCCTCCCTCCTGGCAGATTGcctgtaaatgtttacattaatgacagacattttgaaagaatTTAAGAGAAtatattatatctatatctatttaatatttattcacgCTGCTCATTTTGAAAAACTTACTACTCGGACAAAGTTTggaaagaagaataaaaagaaaagcgttaaaggaaaaaaaaaacttggattGACACCGGCCTGGGAAGGAATGGACAAAAAGaatgacagaaagaaagaaaaaagagggAAGGAGGCAGAGAAGTCGAAAGTGAGTCGGAAATTATTTGCACTACATTTTTCCCCATTCTTTTtccgttttttttaaatatacacctaaaaaggaaaacattcctCAAATGATGCAGAGAACCAAGGATCTTtatcaaatatttgaaaaggcCGGACCTTTTTCTTGCGAATGccatgaaacacaaacagaaaacaaaaaaaaacctaaaatataAGAGAAAAAGGATTCCTCTCCATGAAAATCCGAAAAGGagccttaaaaacaaaaatcatacctacataaataagaaaaagctgcaaaacagaaaaaacacattttgattttgtgtcCAGGTTTTTGTGCAGTTTTTCAATAGGCTCGTGCTTTCACAGAAACATTCCAAAGGAAGGCAGAACATTTTTACGATGGGCTACCAATTCATTTTAGacctaaaaaaggaaaaaaaaaaattaaaaaatcttcaTACAAAGAGTTAAAATTAAGTGCCTATTTTTtggcttagttttttttttttcatttgtttttttaagaaaaagtaaGAAAACTTAAGTAAGAAAAGGTACTATATTTTAACACTGGAACAAAATGTTAtgctattttttgtattttaaattttaccttttttaaagagaattttacatgcatgtatatatataaaaaaaaaacatctctttgggagtctatttttgaaaacaaaatatttcatcCTGATGGAATTGATCCCcagaatacattgttttgtactTAATTGTGTAATATGAATTGTTAGgctatatattatgtatgtatccTTTGTAACTTTTTGGTCATCAAAAACAAAGCTATTTCTATCAATACGATTGTATGGACAAAGctattttttataatgaaagAACAGCCTTAATCACCATCTCCTTGGTTTCTCTGTGATGCAGTAAAGTCTGTatcctgaaaaagaaaaagaaaaaaaaatttaCAGAATGAAGGACTTGAAAATTGATAGTTTTCaatttgttcttctgttttaaaccaaattttgtttgtttaatttaattatatttgtttgtttgttttttacagttattatttctaatttaaCAATGCAATGTGTACAAACAGGCTTAATATTCTttctatataatttaatgtttgtgtaaataccatgtatttataaagagaattgtatatatgtttatgtaaggTGCCTATTATTGTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013604 True 3590 mRNA 0.45 9 37595072 37602985

Neighbor

gene id symbol gene type direction distance location
AMCG00013602 timm50 coding upstream 13640 37574350 ~ 37581432 (+)
AMCG00013599 supt5h,LOC106580766 coding upstream 76094 37487188 ~ 37518978 (+)
AMCG00013601 supt5h,LOC107662786,LOC107597543,LOC107657557,LOC107586261 coding upstream 108262 37411666 ~ 37486810 (+)
AMCG00013600 NA coding upstream 183623 37406291 ~ 37411449 (+)
AMCG00013598 NA coding upstream 201214 37353282 ~ 37393858 (+)
AMCG00013605 NA coding downstream 57412 37660397 ~ 37666944 (+)
AMCG00013606 NA coding downstream 68121 37671106 ~ 37675959 (+)
AMCG00013603 NA coding downstream 73723 37676708 ~ 37683789 (+)
AMCG00013612 NA coding downstream 110763 37713748 ~ 37714896 (+)
AMCG00013609 LOC107382997,LOC102784118 coding downstream 163006 37765991 ~ 37777845 (+)
G45538 NA non-coding upstream 304307 37251201 ~ 37290765 (+)
G45499 NA non-coding upstream 530808 37063957 ~ 37064264 (+)
G45408 NA non-coding upstream 811452 36782569 ~ 36783620 (+)
G45405 NA non-coding upstream 865116 36727950 ~ 36729956 (+)
G45403 NA non-coding upstream 875083 36719652 ~ 36719989 (+)
G45737 NA non-coding downstream 273398 37876383 ~ 37932198 (+)
G45805 NA non-coding downstream 470270 38073255 ~ 38073852 (+)
G45812 NA non-coding downstream 495005 38097990 ~ 38098531 (+)
G45854 NA non-coding downstream 608105 38211090 ~ 38212886 (+)
G45860 NA non-coding downstream 635554 38238539 ~ 38243152 (+)
AMCG00013595 NA other upstream 267361 37315213 ~ 37327711 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other upstream 472461 37111768 ~ 37122611 (+)
G45439 NA other upstream 717469 36874907 ~ 36877603 (+)
G45406 nova2,LOC103039352,LOC103141028,LOC107669728,LOC107089881,LOC107548550 other upstream 856593 36736677 ~ 36738479 (+)
AMCG00013571 eml2,LOC107757343,LOC107685092,LOC106530730 other upstream 949006 36620402 ~ 36646066 (+)
AMCG00013616 ccdc9 other downstream 202222 37805207 ~ 37817764 (+)
AMCG00013618 NA other downstream 215386 37818371 ~ 37821575 (+)
AMCG00013629 hnrnpl2,LOC105006371 other downstream 451912 38054897 ~ 38069645 (+)
G45850 NA other downstream 627581 38230566 ~ 38231330 (+)
G45894 NA other downstream 767671 38370656 ~ 38373198 (+)

Expression


Co-expression Network