AMCG00013612


Basic Information

Item Value
gene id AMCG00013612
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 37713748 ~ 37714896 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013612
ATGATGGCGAACTGCTGCAACTGGGTGACACGGTTAAATCAGCCGTCAAGGAAAGTGACCTTAGTGACATTGGGTCTGGACAAAGCTGGAAAAACAGCGACTGTGAGAGGCATTTTAGGAGAAAATCCAGAAGACGTGGCCCCCACCGTGGGCTTCTCCAAAATCTACGTGAAGCAGGGGAAGTCTGAGGTGACCATCTTCGACTTGGGCGGGGGCAAGAGGATCCGGGGCATCTGGAAAAACTACCACGCCGAGTCGCACGGCGTGGTGTATGTTGTGGACTCCAGCGATGTGGAGCGCATCCAGGAGAACAAGAACACCCTGGCCGAGGTCCTGAGACACCCGCGCATTGCCGGGAAGCCTGTGCTTGTGCTGGCCAATAAGCAGGACTGCGACGGGGCCTTGTGCGAGGCAGACCTCATCAAATCTCTCGCTCTGGAGAAGGTAGTGAATGAAAACAAGTGTTGTCAGATTCAGCCGTGCTCGGCTGTGACAGGCAACGTGAAAAAACAGGACCAGTCCATCAAGAAGGGGCTGGCATGGCTGCTGAGCAGAATCGACAGGGACTATGCGGCCTTGAACGAGCGGGTGGAGAAAGACACGGCCGAGCAGAGGGCCCTGGAGGAGCAGGACAAGCGCGAGAGAGCTGAGCGAGTGCGCCGGGTTCGAGAGGAGCGGGagcaaagagagagggaggaggccGAGCGAGAGGGGAGGGCCGTGccggaggaggaggcggaggatgGCACCATGTCTAACCCTTTCCAGCCCATAACTGACATTATCAATAAGAAGGAGGTCAAGCAGAAAAGAAAGATGGAGAATGAACCAAGCCATTGGCGGTTCCCCTGGCGCTGGGGCCGGCGGAGGACATGCCCACTGACAACAGGCGTGGGAGAGGGGAGCAGTGAGAATGAGGACAAGAGTTGTAGAGAGaaggacaagaagaagaaactgAGGCGGATCCCCTGGCGCCGGGGCTGGGAGAGGACATGCCCACTGACGACGGGCGTGGCGGAGGAGAGCAGCCCCCAGAAGGTCGACAGCGCTGTGTACAATATCTTCACAGCGACACAGAGCtggcaggaagagagagagcggCAGATCCTGGATGAGCCCCCAAAAGGTAACCCCACTCTGCTGGAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013612 True 1149 mRNA 0.58 1 37713748 37714896

Neighbor

gene id symbol gene type direction distance location
AMCG00013603 NA coding upstream 29959 37676708 ~ 37683789 (+)
AMCG00013606 NA coding upstream 37789 37671106 ~ 37675959 (+)
AMCG00013605 NA coding upstream 46804 37660397 ~ 37666944 (+)
AMCG00013604 NA coding upstream 110763 37595072 ~ 37602985 (+)
AMCG00013602 timm50 coding upstream 132316 37574350 ~ 37581432 (+)
AMCG00013609 LOC107382997,LOC102784118 coding downstream 51095 37765991 ~ 37777845 (+)
AMCG00013614 pak4,LOC103368331 coding downstream 130537 37845433 ~ 37852929 (+)
AMCG00013615 NA coding downstream 145493 37860389 ~ 37867034 (+)
AMCG00013613 NA coding downstream 157938 37872834 ~ 37876087 (+)
AMCG00013619 NA coding downstream 237276 37952172 ~ 37959732 (+)
G45538 NA non-coding upstream 422983 37251201 ~ 37290765 (+)
G45499 NA non-coding upstream 649484 37063957 ~ 37064264 (+)
G45408 NA non-coding upstream 930128 36782569 ~ 36783620 (+)
G45405 NA non-coding upstream 983792 36727950 ~ 36729956 (+)
G45403 NA non-coding upstream 993759 36719652 ~ 36719989 (+)
G45737 NA non-coding downstream 161487 37876383 ~ 37932198 (+)
G45805 NA non-coding downstream 358359 38073255 ~ 38073852 (+)
G45812 NA non-coding downstream 383094 38097990 ~ 38098531 (+)
G45854 NA non-coding downstream 496194 38211090 ~ 38212886 (+)
G45860 NA non-coding downstream 523643 38238539 ~ 38243152 (+)
AMCG00013595 NA other upstream 386037 37315213 ~ 37327711 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other upstream 591137 37111768 ~ 37122611 (+)
G45439 NA other upstream 836145 36874907 ~ 36877603 (+)
G45406 nova2,LOC103039352,LOC103141028,LOC107669728,LOC107089881,LOC107548550 other upstream 975269 36736677 ~ 36738479 (+)
AMCG00013571 eml2,LOC107757343,LOC107685092,LOC106530730 other upstream 1067682 36620402 ~ 36646066 (+)
AMCG00013616 ccdc9 other downstream 90311 37805207 ~ 37817764 (+)
AMCG00013618 NA other downstream 103475 37818371 ~ 37821575 (+)
AMCG00013629 hnrnpl2,LOC105006371 other downstream 340001 38054897 ~ 38069645 (+)
G45850 NA other downstream 515670 38230566 ~ 38231330 (+)
G45894 NA other downstream 655760 38370656 ~ 38373198 (+)

Expression


Co-expression Network