AMCG00013613


Basic Information

Item Value
gene id AMCG00013613
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 37872834 ~ 37876087 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013613
CCTGACCCCACGCTGTGGTCGTGTGCAGATGTGGGTGGGGTGGAGAGCGCCTGCGCAATGTGTCGGTTCCCAGCATGGGTGGGGTGGGCTGTGTTCACAAACAGACACTGACTCACTGGCCTTAAATACGGACACCACattgaaaacagcagcacaggcaCAGCGCTTTACGTGAAGTAATAACTGGTACAAAGTAAACTAAATAGGAATATaacacaagaagaagaaaaatgtgtgctGCCACCGACTGGAAACAAAAATGCCAGAGCGAGTGGAAACTGAAGGGGCGGGACATCCCGGCTCCGGACGGTGTGGACTGGAAATCCGTCCACAGCAAGAAACCGTTCAATCGCAACCTGCTGAAAAACCCTGCGCCACACGGTGACTTCAAAGACTGGACAACCAGCACAGAGAGACTTCCACTGGACAGCAGTGGCATCCCTGAGGGTGCGGCCATCTGCCACCTGCCTCAGTACagCTGGTTCACTATGGAGCAGCATGTGGACCTGCTGGGACAGGGGCTGTGGGTGGAGCTGCTGGACTCCTATCAACCGGACATTTGCATCCAGGACTGGTATGAGGAGACCCTGCTGCACAAGTCCCTCTACCAGCTGCAGGTGAAGCTGCTGGGGGCCGACAGAAAGACAGTGATCCAGGAGCACTCCGTCTCCCCCGAGGAAGACCAGAGCCAAGACGAGCATCGCTGGAAGGAGGTCTCGCACAAGTTCAGAGGCTATGGCCCCGGTGTGAGACACGTCCACTTCCTGCACAGACTAAAGTGCATGAGCATGATCGGATTCCAGGCCACACGAGCGACCGACAGCGCCGTGCTGGTCCGGCTGAGGGACTGAACACCATAACGTTCCACAGGATCCATACAAATAGCACACAAACACCATTAACCCCACACACAACCACCGCACAAACTCCATGAAGCTCCACAAACCCCCACATGACCACCGGCCAAAGCGCAGAAGCAGTGGGAGACACCTCTGCCCATCCTGCAGTGTTTATCCCTGCCAGTGCGGCTGGGCAAAAACGCCATCAGCATCCAAACTTGGGACTCTGGTTCAACCAGTTGGGTCCCCTTTGATGTCCGGTCTTAAATCATTTTaggaataataattttgaaaataaaaatgataatgcaGTGTATCTGCCTGTTTGAATTTTTTCTTCCAGACAGTTCCCCTGCAGAGTTCTAGAACCCAAAGTGTATTCTTTTCTAACCAGAGAGGGGGGAGAAAGACAATTTGCTTTTgactgtatttctttttggCTTTTTTCCACAGGGACATCACTCTGTAGAGTTCTGCAATAGTTACCTATTCCGTAACCAGAAAAAAAGGGAAGGCTAGGAATGAGGATTTTTTCTTACTTGCTTTCCAAGATCATAAACCATGTATCTTTTCGATAACTCCATTAAAGACTAGCATAATAACCCTGAAATAATTAGTGTGGGTGTTTGTTAGTTGATAAGTTATTTAGCAAATGCCTTTATCCAAAACAACTGAACCACTACAACAAATCGACTATTGAATCGAATTAAGGTATAAGATTAGAGTGGTCTACACACAGACTGCAGTTTTGACGGCGGGCCTGTGAAACTCTTTTGGCTCTTACTGATTAATACATGTGCCATGGACCCTTTTGAAAGTTCACAGTGGTGTACCATGgtaaaatatctgaaacacaCACTAGAGTGCAGTAAGCAGGGAATGAGATGACATCCAAAGGaatcactgaaaatgaaagtCTTAAAACTTGTACCATTTTGGTGTTACTGGGAAGTATAACTCATTTTCAAAAAACTGATAATGTACAGAAAGCAGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013613 True 1835 mRNA 0.48 5 37872834 37876087

Neighbor

gene id symbol gene type direction distance location
AMCG00013615 NA coding upstream 5800 37860389 ~ 37867034 (+)
AMCG00013614 pak4,LOC103368331 coding upstream 19905 37845433 ~ 37852929 (+)
AMCG00013609 LOC107382997,LOC102784118 coding upstream 94989 37765991 ~ 37777845 (+)
AMCG00013612 NA coding upstream 157938 37713748 ~ 37714896 (+)
AMCG00013603 NA coding upstream 189045 37676708 ~ 37683789 (+)
AMCG00013619 NA coding downstream 76085 37952172 ~ 37959732 (+)
AMCG00013620 eif3k,LOC106612601 coding downstream 84376 37960463 ~ 37964226 (+)
AMCG00013628 NA coding downstream 90563 37966650 ~ 37979137 (+)
AMCG00013627 NA coding downstream 122493 37998580 ~ 38011180 (+)
AMCG00013626 slc8a2,LOC105026810,LOC106612604,LOC106580848,LOC103476200 coding downstream 156522 38032609 ~ 38044550 (+)
G45538 NA non-coding upstream 582069 37251201 ~ 37290765 (+)
G45499 NA non-coding upstream 808570 37063957 ~ 37064264 (+)
G45408 NA non-coding upstream 1089214 36782569 ~ 36783620 (+)
G45405 NA non-coding upstream 1142878 36727950 ~ 36729956 (+)
G45403 NA non-coding upstream 1152845 36719652 ~ 36719989 (+)
G45737 NA non-coding downstream 296 37876383 ~ 37932198 (+)
G45805 NA non-coding downstream 197168 38073255 ~ 38073852 (+)
G45812 NA non-coding downstream 221903 38097990 ~ 38098531 (+)
G45854 NA non-coding downstream 335003 38211090 ~ 38212886 (+)
G45860 NA non-coding downstream 362452 38238539 ~ 38243152 (+)
AMCG00013618 NA other upstream 51259 37818371 ~ 37821575 (+)
AMCG00013616 ccdc9 other upstream 55070 37805207 ~ 37817764 (+)
AMCG00013595 NA other upstream 545123 37315213 ~ 37327711 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other upstream 750223 37111768 ~ 37122611 (+)
G45439 NA other upstream 995231 36874907 ~ 36877603 (+)
AMCG00013629 hnrnpl2,LOC105006371 other downstream 178810 38054897 ~ 38069645 (+)
G45850 NA other downstream 354479 38230566 ~ 38231330 (+)
G45894 NA other downstream 494569 38370656 ~ 38373198 (+)
AMCG00013654 NA other downstream 688402 38564489 ~ 38566281 (+)
AMCG00013665 NA other downstream 769191 38645278 ~ 38673471 (+)

Expression


Co-expression Network