AMCG00013619


Basic Information

Item Value
gene id AMCG00013619
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 37952172 ~ 37959732 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013619
CACACCGGCGCATCCTATGTAACTGCAGTCAGAAATAGTGACGATCTCTGCTGGAGCGGAGAGCTGTGTTTGGTCATGGAGGGGTTCAGGGGCCGAGAGTGCGCCCAGGCCGTTTGCCATGAGTTGGATAACAAGGCATCGAGGGAGGCAGGGATCAGCTTTCACCGATTCCCGAAGAATCCCGAAAGGAGGAAGAGATGGGCTTTCTTAATGGGCCGCGAGGACAACTGGGTGGCTAAGGACTGGAGTGTGGTCTGCAGCAAGCACTTCAGGCCTGAAGATATTGACCGCACCGGGCAAACCATCCGTCTCCGGGCTGGGGTGGAGCccagcattttttttcatttgcctGGTAATCAGCAAAAGAAAACTAGAAGCAAGGAAACACGAGCTTCGCAATCTCTATCTGCCGCTGTGTGTCAGTCCAACTCCAGCTCAAATAAAATTGCGCACTATGAAGTTATTAGTGAGTTCCACAGCTACTGCGCCCCCACCGAGGCCAGCCTGAAGCACAAGTCACGGCCGACAGTCGACCACCGTGAGAAGCTGCAGCGAGATTTGCGGAGCGCCACTTCGGGAGAGAAACGCCGCCGGAGGACCAAATTCCCCATGCAGCTGTTCACCAAACCCAGGCGCCGGGGCGGCTTCAGCCAGGCGCAGATTGACCTGGCTCTGGCGCTTCATCTTTATGGACCGAAGGCATACCAGTACCTCAGAGACACTGTGCAGCTGCCTCTGCCCAGCCCTGCTTCAATGCTGAAGGTTCTCGGGCAGAAGGCGGCAGAAGATCCTGAGACCTACCGGAACGTGTGTCTGATGATGGACGGGATTGACATCAGGAAACAGGTCTGCTACGATGGCTCCCTGGAGAGAATGACAGGATTTGTGGACTTGGGGGACAACCTGGAGAGTGATGACGAGGCATCGCAGGCGCTGGTGTTCATGGTGGTTGGGTTAAGGGGTTATTGGAAGGCACCCATCGCCTACTTCCTCACAGCAACGCTGGAAAAGAGGGCCCGGGCCACGCTGCTGAAGCACGCTCTGGAGCTGCTGTCGGACGTCAAGGTGGATGTCCAGGTCGTGACCATGGAGGGCTCGTCCTCTCACCTGTCCATGTGCAGAGACTTGGGCTGTGATTTTCACATGGACAGATTGGCCACCTTTTTCCCTCACCCGTCCACAGGGAACAAAGTGTTCGTGGTGTTGGACCCACGCCGCATGCAGGTCTTGACCAAGAACCTGGTCCACTCGCTCGGGACAATCCGATCGAGCAGCGGAGAGATCGGCTGGCGTTTTATCAGCAGCCTGAGGCGGGTGCAGGAGGGCCTTGAGCATGGCAGAGAGGTGACTGCCGGACAGCACCGCCACGCAGATCTGCCCATGGAGGTGAAGCGTAACGCACAGGTGTTCAGCAGCTCGGTCTCCGATACTATTCAACGCCTGTGTAAGGCTGGACACCCTGATTTCCAGGATGCCATGTCGACTGTGGAGTTCCTGCAGCTCATAGGTCAGCTGTTTGACGTCCTGAACTCCAGGAACCCGAGGGCAAAAGGATACAAGTCCCCAATCAGAGCTGAAAACTGGAATGAGGTTTCAGAGTtcctgaagaaaacaaaagcAGACAAGATGGGACCCCCCTATTCACCTCTAACAGaaggCTGGGCTGGGTACCCTAACGCAGCTCAGTTCAGAACAGCCTTCCAGAAAGTCCTGGCCAGGTGGGTCAGTCCTCTGAGCAGGCCAGGCAGAGCAGGGCAGCTGGGGGAAACCACGAGTCCTGCTCTGGCATCGGCTGCATTTCCTGGATCCCAAGTCCTGTGCGACGATGACAGAGATGCGATGGAGGATGGCGATTTGTTTGTACAAGATGCCCACCTGAGGATTGCCGTGGAACCCGATTACTCGGCCCCCAGGCACAGAGGGGTCCTGGCAACTGCAGAAAATTGTGTCTCGTATAGTGCGGGGTGGGTGGTCCGTCGAGTGAGTGCCATCATCTCCTGCAGCACCTGCACAAACTCCCTGCTCTCCGGCGAACCAGCCGAGCATGCTCAGTCCTATCGCTTGCTGCAGCTGAAGAGTGACGGGCGCTTGGTGGTGCCGTCTTCAGGTACAGTGTCTATTTTGCACGAGTGTGAAAGGAGCATTGGCAGAGTAATGAAGGCACAGTATGCTGAGGGAGTCTGCACACTAGAGCAAGTATCGAGACTGGTTAAGGAAACTATAGGGCACAAGGATGTGTTTGGTCTCGGCAGTCACAGCATGGAGACACAGTATGGGATTGATAACCACCATTTCGATCTCATATCTGTCTTGGTGCGGGTTTATTACCAGCTCAGGCAGCGCCACATCAAGAACACGTACAGCCTTCGAAATCGGGGACAGCTAGGGAGAAGTGTGTCGAGGAATCAGCTTGTGTTTTACTGACGAGGAAAAGACCTGCAAACTGTGaggattatatttatatttgttgctTCCAATGTTCGTTTAATACAGATAGAGACACAGGGCACCCCTGCACTCTGGGCAACAGAGAACATCATCGCACCTACAAATATATGCAATTTGCTTgatgattttaatgaaaattgaaGCTGCACAGAAAATCAGGTGCCCTCTCATTTTCAGTATGAAAACCAGTAGGTGAAGAATTGTTTCACTTACTCATGGATCTGATTGGAGGTGCtgtgtattatatgtattttatatttgaattgtatgaTGCAATAACAGTGTATTTTCAATTATGTTATGACTGTATATTAAACAATGCATTCTTGTGCATTTGGGTACGTTTTCTAACTTGTAATAAGCTAAACTTAATGTAAATATCAGTGGATATAAATCCTATATGtagaaatcaatattaatcAAAGATGCATATTGATGGTGATGAACAGACTCAATGAAGAACACATTTGGAAATCTTATTTTGAAAGTGCCTGAAGTTACTGAAATAAACCTGTGCCTAAATTGAGCGTTAATTATGtgtgaattgctttgttttcagtgaaGTGCTG

Function

GO: NA

KEGG:

id description
K23209 THAP9; DNA transposase THAP9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013619 True 3017 mRNA 0.51 10 37952172 37959732

Neighbor

gene id symbol gene type direction distance location
AMCG00013613 NA coding upstream 76085 37872834 ~ 37876087 (+)
AMCG00013615 NA coding upstream 85138 37860389 ~ 37867034 (+)
AMCG00013614 pak4,LOC103368331 coding upstream 99243 37845433 ~ 37852929 (+)
AMCG00013609 LOC107382997,LOC102784118 coding upstream 174327 37765991 ~ 37777845 (+)
AMCG00013612 NA coding upstream 237276 37713748 ~ 37714896 (+)
AMCG00013620 eif3k,LOC106612601 coding downstream 731 37960463 ~ 37964226 (+)
AMCG00013628 NA coding downstream 6918 37966650 ~ 37979137 (+)
AMCG00013627 NA coding downstream 38848 37998580 ~ 38011180 (+)
AMCG00013626 slc8a2,LOC105026810,LOC106612604,LOC106580848,LOC103476200 coding downstream 72877 38032609 ~ 38044550 (+)
AMCG00013625 NA coding downstream 91489 38051221 ~ 38053561 (+)
G45737 NA non-coding upstream 19974 37876383 ~ 37932198 (+)
G45538 NA non-coding upstream 661407 37251201 ~ 37290765 (+)
G45499 NA non-coding upstream 887908 37063957 ~ 37064264 (+)
G45408 NA non-coding upstream 1168552 36782569 ~ 36783620 (+)
G45405 NA non-coding upstream 1222216 36727950 ~ 36729956 (+)
G45805 NA non-coding downstream 113523 38073255 ~ 38073852 (+)
G45812 NA non-coding downstream 138258 38097990 ~ 38098531 (+)
G45854 NA non-coding downstream 251358 38211090 ~ 38212886 (+)
G45860 NA non-coding downstream 278807 38238539 ~ 38243152 (+)
G45862 NA non-coding downstream 286224 38245956 ~ 38246418 (+)
AMCG00013618 NA other upstream 130597 37818371 ~ 37821575 (+)
AMCG00013616 ccdc9 other upstream 134408 37805207 ~ 37817764 (+)
AMCG00013595 NA other upstream 624461 37315213 ~ 37327711 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other upstream 829561 37111768 ~ 37122611 (+)
G45439 NA other upstream 1074569 36874907 ~ 36877603 (+)
AMCG00013629 hnrnpl2,LOC105006371 other downstream 95165 38054897 ~ 38069645 (+)
G45850 NA other downstream 270834 38230566 ~ 38231330 (+)
G45894 NA other downstream 410924 38370656 ~ 38373198 (+)
AMCG00013654 NA other downstream 604757 38564489 ~ 38566281 (+)
AMCG00013665 NA other downstream 685546 38645278 ~ 38673471 (+)

Expression


Co-expression Network