AMCG00013627


Basic Information

Item Value
gene id AMCG00013627
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 37998580 ~ 38011180 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013627
atgtctgtgtgcagcagcggggggggggcagaggctGATAATTCCAGAGCTCTGGCTAAGAATGGGTGTCCTTGCCGGAGCTTGCGTAGACGGGGAGTGATCGGGAGGCACAGAGCGAGTGGGACCTTCACGGCCTGGTGTAACTCTCATCTGCGTAAGGCCGGCACGCAGATCGAGAACATCGAGCAGGACTTCAGAGATGGGCTCAAACTCATGCTGCTGCTCGAGGTCATTTCAGGAGAAAGGTTACCCAAGCCCGAGAGAGGGAAGATGAGGGTCCACAAGATCAACAATGTCAACAAAGCCCTGGATTTCATCGCCAGCAAGGGCGTCAAGCTGGTGTCCATTGGGGCTGAAGagaTCGTGGACGGAAACGCCAAGATGACTCTGGGCATGATCTGGACCATCATCCTGCGCTTTGCCATCCAGGACATCTCTGTGGAGGAGACCTCTGCGAAGGAGGGACTGCTGCTGTGGTGTCAGAGGAAAACCGCTCCGTACAAGAACGTCAACGTGCAGAACTTCCATATAAGCTGGAAGGACGGTTTGGCGTTCAACGCGCTGATCCACCGGCACCGACCCGAGCTCATCGACTACGACAAGTTGAGAAAGGACGACCCTATCACTAATCTGAACAATGCCTTTGAGGTGGCGGAGAAGTACTTGGACATCCCCAAGATGTTGGACGCAGAAGACATTGTGAACACAGCTCGCCCTGATGAGAAGGCTATAATGACCTATGTGTCCAGTTTCTACCATGCCTTCTCGGGAGCACAGAAGGTACCCCACTACAGCTCGGGGTCACAGGCTCAGGGCTGCGGGGCCTGGGGCGGTGGTGTAGGGagagagagggtgggggaaGACATCGTGGGCACGCTGAGGCCTGATGAGAAGGCCATCATGACCTATGTGTCCTGCTTCTATCATGCCTTCTCTGGGGCACAGAAGGCTGAGACTGCTGCCAATCGTATCTGCAAGGTCCTGGCTGTAAACCAGGAGAATGAGCACCTGATGGAAGATTACGAGAAACTTGCCAGTGATcTGTTGGAGTGGATCAGGCGCACTATCCCCTGGCTGGAGAACCGGGCCCCGGAGCGCACCATGCATGAGATGCAGCAGAAGCTGGAGGATTTCCGTGGGTACCGGCGGGTCCACAAGCCACCCAAGGTCCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACTCTGCAGACCAAACTGCGGCTTAGTAACCGGCCCGCCTTCATGCCCTCAGAAGGGCGCATGGTGTCGAAGGACTATGAGACGGCCTCCCTGTCCGAGGTCAAGGCCCTGCTGAAGAAGCACGAGGCCTTTGAGAGCGATCTGGCGGCCCACCAGGACAGAGTGGAGCAGATCGCAGCCATCGCTCAGGAGCTCAAtgagctGGATTACTACGACAGCCCCAGTGTGAACGCTCGCTGCCAGAAGATCTGTGAGCAGTGGGACCGGCTGGGCTCCCTGACGCAGAGCCGCCGGGAGTCCCTGGAGCGGACAGAGAAGCAGCTGGAGTCCATTGATGGGCTGTACTTGGAGTATGCCAAGAGGGCGGCACCCTTCAACAACTGGATGGAGGGAGCGATGGAGGACCTGCAGGACATGTTCATCGTGCACAACATCGAGGAGATCCAGGGTCTGATCTCTGCCCACGAGCAGTTCAAGTCCACTCTACCCGAGGCTGATAAGGAGCGGCAGGGCATCCAGGGTATCCAGTCCGGCGTCCAGTCCATCGCCCAGCAGCATGGCATCCGGCTGGCCGTGGGCAACCCCTACACCTCCATCACCCCCCAGGCCATTGACAGCAAGTGGGAAAAGGTACAGCAGTTGGTCCCCCAGAGAGACCAGGCACTGCAGGAGGAGTTGTCACGGCAACAGTCCAACGACCATCTCCGCCGGAAGTTTGCCACCCAGGCCAACATGGTGGGACCCTGGATCCAGAACAAGATGGAGGAGATCGGGCGGATATCGATCGAGATGAACGGCACGCTGGAGGACCAGCTGAGCCACCTGCGGCAGTACGAGCAGACCATCATCGACTACAAGCCACACATCGACACTCTGGAGGGAGACCACCAGCTCATCCAGGAGGCCCTTATCTTCGACAACAAATACACCACCTACACCATGGAGCACCTGCGTGTGGGCTGGGAGCAGCTGCTGACCACCATTGCTCGCACCATCAACGAGATCGAGAACCAGATCCTCACCCGCGACGCCAAGGGCATCAGCCAGGAGCAGCTGCATGAGTACAGAGCCTCCTTCAACCACTTCGACAAGGATCACAGTGGGGGTCTGATGGCGGAAGAGTTTAAAGCCTGTCTCATTAGCTTGGGCTACGATGTGGAAAGCAACAAGCAGGGTGACGCGGAGTTTGCACGCATCATGGGCGTTGTTGACCCCAACAACAGTGGGGTTGTGACCTTCCAGGCGTTCATCGACTTCATGTCCCGAGAAACGACCGACACGGACACCGCAGACCAGGTCATCGCCTCCTTCAAGATCCTGGCCGGAGACAAGaACTACATCACGGCGGAGGAGCTGCGCAGAGAGCTGCCCCCGGACCAGGCGGAGTACTGCATCGCCCGCATGGCGCCCTACATTGGCCCCGACGCTGCCCCCGGAGCCCTGGACTACATGTCCTTCTCCACCGCCCTGTATGGCGAGAGTGACCTCTAAGCCCCACCCACGACCCCTGACCTTTCCCATCTACCCCGACACCCCAATCTCAGTCCCCAGCTTGACTCTGCCTGTGCTGTTTGGTTCAAGGTTAGTGGCTAGGCCTGGTCTGGGTTAAAGGTCAAGGGTTACGGATTTTGACTGAGTTGGCAAGGGGCTTTTGGTCCTTTGACCTCCGACCTCCAACTTCAATGCTCACCTCTGAGTCAACTTTGACACCCCAGACCCTCTTAATTACACAACATGACACCCTTTCTCTTACCCTAATTGAATTTTTGTCCTAGTATATATTGGGAGCCTGACCTATGAGCTCAGACCTGATCTATTGTAGTTGTAGAGCTAGTCTGTTCTTGTGGATGAGGTTATCCAGACCCTATGACCAGATCTAGTCCAGGTCTCGCCCTGGTCTGTGTTTTAGGAGTATGGGGTTGtttgtgggtggggggtggtgtgGTGAAGTGTGTAGGGGTTGTGTGGGCCATTTGGGCTttggagagagtgagtgagtttagttttgcattgtgtgtgtgtgtgtgtgtggagagagagagagagagaga

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013627 True 3254 mRNA 0.57 24 37998580 38011180

Neighbor

gene id symbol gene type direction distance location
AMCG00013628 NA coding upstream 19443 37966650 ~ 37979137 (+)
AMCG00013620 eif3k,LOC106612601 coding upstream 34354 37960463 ~ 37964226 (+)
AMCG00013619 NA coding upstream 38848 37952172 ~ 37959732 (+)
AMCG00013613 NA coding upstream 122493 37872834 ~ 37876087 (+)
AMCG00013615 NA coding upstream 131546 37860389 ~ 37867034 (+)
AMCG00013626 slc8a2,LOC105026810,LOC106612604,LOC106580848,LOC103476200 coding downstream 21429 38032609 ~ 38044550 (+)
AMCG00013625 NA coding downstream 40041 38051221 ~ 38053561 (+)
AMCG00013630 LOC101464407 coding downstream 65825 38077005 ~ 38087811 (+)
AMCG00013631 NA coding downstream 107144 38118324 ~ 38121804 (+)
AMCG00013638 NA coding downstream 177194 38188374 ~ 38194330 (+)
G45737 NA non-coding upstream 66382 37876383 ~ 37932198 (+)
G45538 NA non-coding upstream 707815 37251201 ~ 37290765 (+)
G45499 NA non-coding upstream 934316 37063957 ~ 37064264 (+)
G45408 NA non-coding upstream 1214960 36782569 ~ 36783620 (+)
G45405 NA non-coding upstream 1268624 36727950 ~ 36729956 (+)
G45805 NA non-coding downstream 62075 38073255 ~ 38073852 (+)
G45812 NA non-coding downstream 86810 38097990 ~ 38098531 (+)
G45854 NA non-coding downstream 199910 38211090 ~ 38212886 (+)
G45860 NA non-coding downstream 227359 38238539 ~ 38243152 (+)
G45862 NA non-coding downstream 234776 38245956 ~ 38246418 (+)
AMCG00013618 NA other upstream 177005 37818371 ~ 37821575 (+)
AMCG00013616 ccdc9 other upstream 180816 37805207 ~ 37817764 (+)
AMCG00013595 NA other upstream 670869 37315213 ~ 37327711 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other upstream 875969 37111768 ~ 37122611 (+)
G45439 NA other upstream 1120977 36874907 ~ 36877603 (+)
AMCG00013629 hnrnpl2,LOC105006371 other downstream 43717 38054897 ~ 38069645 (+)
G45850 NA other downstream 219386 38230566 ~ 38231330 (+)
G45894 NA other downstream 359476 38370656 ~ 38373198 (+)
AMCG00013654 NA other downstream 553309 38564489 ~ 38566281 (+)
AMCG00013665 NA other downstream 634098 38645278 ~ 38673471 (+)

Expression


Co-expression Network