AMCG00013630 (LOC101464407)


Basic Information

Item Value
gene id AMCG00013630
gene name LOC101464407
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 38077005 ~ 38087811 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013630
ATGGCCAGCATTTTCATGCAGTCAGAGGAGGGCGACACGGCCCGAGCTGCCTGGAAACTGCGGCGCACCATACAGCTGTACCAGGACACCTTCACTGTCATCGAGAAGGAAGTTGACATTGGGCTGGCAGCAGATGTGGGGACTCTACAGCGCCTCCCCAAAGCGATTGGCAGCCGGAGCCTGGTGAATGATCTCGCTCTCACGGCCAGGAAGATGTGGTCTGATGAAGCCAAAAGCTGCGGACTCATTAGcCGTGTGTTTGCTGACCACGAGGCTCTGATGGCGGGGGCTCTGGCCATTGCCGAGGAGATTGCGGCCCGTAGCCCAGTGGCGGTCCAGGGCACCAAGGTCAACCTGCTGTACTCCCGTGACCACAGTGTGCAGGAAAGCCTGGACTACATTGCCACCTGGAACATGAGCATGCTGCAGACAGAGGACATTATCAAGTCGGCACAGGCTTCGCTGGAGAAGAAGAGTCCCAAACAAGTGCCTTTCAGCAAACTcATGTCAGTGGTGGTTCTGCTGTACCTCCTCCTGGGTGGGGTAGTGCAGAGCCCCCTGATGGAGGGGGAAGATCAGTGCAGGTTGGAGATGCAGGTCCATGACAGGGTGTGGGAGAGGTATCTGAACCTCATGCTGCAGACCTTTCACCAGGAGATCAACTGCCTGAGTCAGAGGGCATCAGCAGAGGTCATGCTTTGGTGGAGTTGGGAGGAATGTACCTGGAGGACTCTGACCCGAAGGCATGGGTACTGGTTTCTGGGAGTGGGGTTGGTCCTGTGTGGGCTGGTCTTCTGGGGCCTGTGTGGGCTAATCTTCTGGGGCCTATGCTTtaggaggagaaggtggaagAAGGAGGTTCTAGTTGACACTGTGGTTTACAGAGTACAGGGACAGGTGGATGAGGATGGATCTGAAGGAGGACGAGAGGCAGACACAAATTCGGAGATGGAGACAGAAGCAGAGACAGAGGTTGACACAATGGCAGAGCATGAGAAAGAAGCAAATGCAGAGCCAGAGGTTGACACAATGGCAGAGCAGATGCTGACAGACCAGCTTAAAGTCACCTCTAAATGGGGTGTAGGCGGCTCAGGCAGAGATAGCTGTTTTGTCCAGGGAGTGGTGGAACATCTCCTGGATGTGGCACGGGGCTCCAGCCAGCTGTGTAGTGATGTGTTGCAGGAAGGCTGTCTGGGTGTGGGCAGCCAGTTTGAGGGCTGTTGGAACAGTGGCAGACAGCAAGAATCTGACTTTGATATGTTGGTGGTCATCAGCCCGCCCTACGCTTTCTCCTTCCATGTGGAGCTTGGCTATAGCGAGACTAGCAATCCCTTGGCTTGGGTGCCCCCCACTGACTACCACGGAGAGGGAAGGGTGCGTTTAATGAGGGTCTTCCCGCCCTCTCTGGGAATGTCACCCAGGCCTTGTGAGCTGAAGAGCAGTGTGGAGTGGATGGTACCCGGGGAGTACCTGGAGCCAGCCCTGGTGCTGCAGTGGCTGGGAAGTGTTCTAAAGAAGTCCTGGGGCCAAAGAAAAACTATGAAGGTGAGCTTTGGGGAAGCGGTGTGTCCTTGCAGGCTGCGGGTCGAGAATCCTTCAGGCCAGAGCCTGTGGGTGAACCTGGTGCCCGCAGTGAGAGTGGAAGGCACCGATGTGTTCCTGGTGACCCAGGGACCCGTACTGCGACCTCCCGACCAGTGGAGCCAGTGCTTCAGTGTGGACGAGGGCAACTTCCTGCGGGACGTGACTCAGAGGATGGCGAGTGATTCGTGCCACCTCAAATGTCTGCGTATGCTCTCCCTCGCCAACACCCAGCCAGTGTCTCGCAGCCCCACAGtccccttctcctccttcctGACCTCCAACCATCTGAAGACGGTCCTGCTGTTCATGTTGTCTGTATGGCCCAAGCCACAGTTTTGGACGGAGGGGCAGCTGGCTGTGCGGCTCCAGGACGCTCTGGATTTGCTGCGGAGACACCTGGAGCACAAGCAACTCTTCCACTTTGCGGTGTGGACCCGGGCCCTGGGCTTGCGCCAGGAGTTCTCCCAAACCTCACCCATCAACCTCTTCGAGCCACTGAAGCAGGACCCCAATCTGCACATGGTGGCAATGAAAGACCTCGAGCGGCTAACTGCACGGCTCAGTCCCTTCACACAGACGTCTGAAGTCCAGACATAG

Function

NR:

description
delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial

GO: NA

KEGG:

id description
K12663 ECH1; Delta3,5-Delta2,4-dienoyl-CoA isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013630 True 2181 mRNA 0.57 6 38077005 38087811

Neighbor

gene id symbol gene type direction distance location
AMCG00013625 NA coding upstream 23444 38051221 ~ 38053561 (+)
AMCG00013626 slc8a2,LOC105026810,LOC106612604,LOC106580848,LOC103476200 coding upstream 32455 38032609 ~ 38044550 (+)
AMCG00013627 NA coding upstream 65825 37998580 ~ 38011180 (+)
AMCG00013628 NA coding upstream 97868 37966650 ~ 37979137 (+)
AMCG00013620 eif3k,LOC106612601 coding upstream 112779 37960463 ~ 37964226 (+)
AMCG00013631 NA coding downstream 30513 38118324 ~ 38121804 (+)
AMCG00013638 NA coding downstream 100563 38188374 ~ 38194330 (+)
AMCG00013640 NA coding downstream 258006 38345817 ~ 38353162 (+)
AMCG00013646 NA coding downstream 294658 38382469 ~ 38398767 (+)
AMCG00013647 napa,LOC108413256,LOC103368726 coding downstream 363978 38451789 ~ 38458783 (+)
G45805 NA non-coding upstream 3153 38073255 ~ 38073852 (+)
G45737 NA non-coding upstream 144807 37876383 ~ 37932198 (+)
G45538 NA non-coding upstream 786240 37251201 ~ 37290765 (+)
G45499 NA non-coding upstream 1012741 37063957 ~ 37064264 (+)
G45408 NA non-coding upstream 1293385 36782569 ~ 36783620 (+)
G45812 NA non-coding downstream 10179 38097990 ~ 38098531 (+)
G45854 NA non-coding downstream 123279 38211090 ~ 38212886 (+)
G45860 NA non-coding downstream 150728 38238539 ~ 38243152 (+)
G45862 NA non-coding downstream 158145 38245956 ~ 38246418 (+)
G45863 NA non-coding downstream 162216 38250027 ~ 38252663 (+)
AMCG00013629 hnrnpl2,LOC105006371 other upstream 7360 38054897 ~ 38069645 (+)
AMCG00013618 NA other upstream 255430 37818371 ~ 37821575 (+)
AMCG00013616 ccdc9 other upstream 259241 37805207 ~ 37817764 (+)
AMCG00013595 NA other upstream 749294 37315213 ~ 37327711 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other upstream 954394 37111768 ~ 37122611 (+)
G45850 NA other downstream 142755 38230566 ~ 38231330 (+)
G45894 NA other downstream 282845 38370656 ~ 38373198 (+)
AMCG00013654 NA other downstream 476678 38564489 ~ 38566281 (+)
AMCG00013665 NA other downstream 557467 38645278 ~ 38673471 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other downstream 568785 38656596 ~ 38707354 (+)

Expression


Co-expression Network