AMCG00013640


Basic Information

Item Value
gene id AMCG00013640
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 38345817 ~ 38353162 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013640
ATGTCCCTCCCCCACCCTTCCATCTCGCCCCCTTCtctcttccttctcctcctcctcccctcccatCTCTGCAGGAAGAGTCGTCAGGAGCTGAGTGGGGTGGCCCTGACGGGGGGTGGCGGGGGCGGGGGCATCCGGGGGGCAGGGGGCCGGGCGGTGCGAAGGAGAATGACCTGCCCCAGCCCCCAGGAGATCAGACATGCACTGAGCCCACATGGAGTGAGCCTGGACGAGCTCATCGAACGCTGTCTCAACTGCtttgACGGGGAGGGGCGGCTGCGCAGCAGTCAGCTGGTCAGCATGACTCTGATGATGCACTGCTGGTTGTGCATCCTTGACTATGTCACCTATCGGGACTGTCCTGTGGACAAGAGGAACTACATAAGACCAAGAATCTGCTACTTTATCAGGCAGTGGATCAGGCAGTACCCTGCAGTGTTTAACGGGGATGCCCATTTGGAAGAGGTGATGGAGGAGCTGGGGGAGCTGTCTTGCTGCAGGCGGCTGACCCTGGGGGAGGGCAGCGGGGGATTGAAGAAGCGGAAGGTGTCCCTGCTGTTTGACCACATGGAGCCGTGCGAGCTGGCCGAGCACCTCAGCTACCTGGAGTTCAAGAACTTCTGCCGTGTCTCCtaCCGGGATTACCAGAGCTATGTGCTGCGGGGCTCTGTGCGGGAGAACCCTGCGCTGGAGCGCTCAGTCACGCTGTGCAACGGTGTCTCTCATACTCTGATGGCGGTGATCGGGGGCCTGTGTCACAGTGCCATCTCCCGACTCAAGGACACCGCCAACCTGCTGCCCCCAGAGGTCACCAAGACTCTGAGTGAGCTGACGGAGCTGCTCTCCTCCTGCAGCAACTACAGCACGTACCGGCGGGTGTACAACGAGTGCCCCGGGTTCAAGGTGCCCATCCTGGGGGTGCACCTGAAGGACCTGGTGTCCCTGAATGAGGCGCTGCCCGACTACCTGGCGGACGGCAACATCAACCTGGCCAAGCTGCAGAGCCTGTACAGCAGCCTGTCTCTGGACCTGTTCTACACAGAGGATGAGATCTATGAGCTGTCCTATGCCAAGGAGCCCAGGAACCCCAAGATACAGTCCATTATGAAGAACTACGACCACAACCAGGACGGCTATATCTCCCAGGAGGACTTTAAGAAAATCGCAGACAGTTTCCCCTTCTActactgcacacagcacagcgaCAGggAGGGGGAGATGAGTCGAGAGGAGGTGCAGTCCTACTTCATGCGGGGGATGTCAGTGTGGGCCAAGCTGGGCTTCGACTTCCGCCACAGCTTCCACGAGACCACCTACAAGAAGCCCACCTTCTGTGACACCTGCGGCGGCTTTatgTGGGGTGTGATCAAACAGGGATACCGCTGCAGAGGCTCTGAGGAGGACAGCTTTGTGTTCCCACATGGCAACGAGGGGGCGGAGCTTGGTGAGGACACCAGCTTGGATGACCGGCTTTCGGACCGGTCCACTCAGACAGACCCAGGGGTGTGGACTCCGGGTCTGCATGACCGGGGGGGTGGTGGTATCCTCAGTCCTTATAGTCCAGGGTCTCCCCTCATCCTGCAGAGGACACACAAGAAGAACCTCTGCTCTTCTGGAACATACCGGGAAAGGTTCTGGAACAACGGTGTGATCCAGCCATGCTCcgaggGTTCCGCAGGGCCCAGAAATGTCTTTGCCGGGCCCAAGCTCAAGTCTTCCAACGAGAAcacaaatgttacaaaacacACCACCTTGGGTCCCCCTGGGCCACCCTCGGGCACCTGGGCCATGGGGTGA

Function

GO:

id name namespace
GO:0050794 regulation of cellular process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013640 True 1797 mRNA 0.60 15 38345817 38353162

Neighbor

gene id symbol gene type direction distance location
AMCG00013638 NA coding upstream 151487 38188374 ~ 38194330 (+)
AMCG00013631 NA coding upstream 224013 38118324 ~ 38121804 (+)
AMCG00013630 LOC101464407 coding upstream 258006 38077005 ~ 38087811 (+)
AMCG00013625 NA coding upstream 292256 38051221 ~ 38053561 (+)
AMCG00013626 slc8a2,LOC105026810,LOC106612604,LOC106580848,LOC103476200 coding upstream 301267 38032609 ~ 38044550 (+)
AMCG00013646 NA coding downstream 29307 38382469 ~ 38398767 (+)
AMCG00013647 napa,LOC108413256,LOC103368726 coding downstream 98627 38451789 ~ 38458783 (+)
AMCG00013648 NA coding downstream 114370 38467532 ~ 38468896 (+)
AMCG00013649 NA coding downstream 123805 38476967 ~ 38478698 (+)
AMCG00013655 NA coding downstream 193166 38546328 ~ 38550955 (+)
G45863 NA non-coding upstream 93154 38250027 ~ 38252663 (+)
G45862 NA non-coding upstream 99399 38245956 ~ 38246418 (+)
G45860 NA non-coding upstream 102665 38238539 ~ 38243152 (+)
G45854 NA non-coding upstream 132931 38211090 ~ 38212886 (+)
G45812 NA non-coding upstream 247286 38097990 ~ 38098531 (+)
G45865 NA non-coding downstream 752 38353914 ~ 38354711 (+)
G45941 NA non-coding downstream 64403 38417565 ~ 38474315 (+)
G45951 bckdha,LOC102788451 non-coding downstream 116892 38470054 ~ 38472706 (+)
G45990 NA non-coding downstream 171550 38524712 ~ 38525412 (+)
G45999 NA non-coding downstream 183366 38536528 ~ 38537058 (+)
G45850 NA other upstream 114487 38230566 ~ 38231330 (+)
AMCG00013629 hnrnpl2,LOC105006371 other upstream 276172 38054897 ~ 38069645 (+)
AMCG00013618 NA other upstream 524242 37818371 ~ 37821575 (+)
AMCG00013616 ccdc9 other upstream 528053 37805207 ~ 37817764 (+)
AMCG00013595 NA other upstream 1018106 37315213 ~ 37327711 (+)
G45894 NA other downstream 17494 38370656 ~ 38373198 (+)
AMCG00013654 NA other downstream 211327 38564489 ~ 38566281 (+)
AMCG00013665 NA other downstream 292116 38645278 ~ 38673471 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other downstream 303434 38656596 ~ 38707354 (+)
AMCG00013681 NA other downstream 458783 38811945 ~ 38821954 (+)

Expression


Co-expression Network