AMCG00013646


Basic Information

Item Value
gene id AMCG00013646
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 38382469 ~ 38398767 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013646
CGCATTCCTGCAACACTGTCTgagcaaggagagagagagagagagagagagactcactcataaagaaagaaagaaagaaagaaagagagagagagagagtgagtgagagagtgagagtgagtgagtgagtgagtgagtgagttgcAGGATCTGTAAATCAGTCGTTAGCAGCCGTGGATTGAGAAAGAAGACTCGGCGACATCTCGGTccctacacacagacacacacacgcctgGTTAGGGATCGtcagacagaaacacagccaTGAACCCAGTCCCCACAATGGACAGCAGCATGTTCCttCAGAGTCTCAGCAGTGAACTGGATGCCTCTCTGGCCACGGCAGACGAGCTGTCCAGGGAATTCAACAGCTTGTTTCAGCAGGCCTCCCCCATCAGCCAGCCCACTGGGCAGACCTGGGCCTCTTCTACCAATGCTTCCACCACCTCCGGCTCCGTCTACAGCTCTGGCTCTGCCTCCAGCTGGCAGTCCAACCCAGCCACCTCCCAGACTTTCTCCAGCCTGCCCAGCAGCAATGGGGATAGAGGCAAGGGCGGAtctggcagcagcagcagcagcagctatgAGACGGGCTCCCAGTCGCTGCCCTACATCTCCAGCTCTGAcggaggtggagggggagggggaggggggggcaacTCTCTCCGGTCTCAGGACAAGTACGCCCCCATTACCCCATCCCACCTTTACTCCCCCCATCAGCTCACACCCCCCCAGGCCAGGAGAGAGAGGATCTCCCCGTCCCTGACCCCCACCGCTGACTCCACCTACTCCTATGGTCAGCTGACCTCTCCCAACCAATCCCCTCGCTCCCAGAGACGCCCTTTTGCACCCAGCTCCCCCTCCCCGCACCTCTCCCAGGGCTCAGATTTCGACCAATCCCTGCGTCTGAAGCTTCAGAACCCCTCCTCCTCACTGAAGTCGGCTGTTCAATCCGGACACGGTTCCCCGGAGCTGGAGAGGATGTTCTCACCCCGGCCAATGAGGAACGAAGTGGACTCCACCTTTGACTACTCATCTCTCCCAATAAGGCGCCATGCCCCCACACCTTCCAAGGCTGCACAGTATGAGGTCAGTCAATTGTGGCATGGCGGGGGTGGGACCCTGGACAGGAACCCCTTCCCCAGGCCAATCGGCAGCAACCAGACCGCTTCCAACACCCTGCCAAGGAACTTTGGCTTCAGATCAGCTgAGTCGGAGTGGCACAGGCCCTCTGTGGCCCCTGCCAACTGGAGAGAATCCAACCTGGACAGCCCTACCCCAGCCCGGAGCAAGgAGGTGCAGTCTCGGGTGCTTCACACATtgccctcctcctcccactcCATCCCCAGGAACACACACATCTCCCTGGTTCCCTCCCCATCCCCCTCCCTGTCCTCCTCCCCCTACCCGCCCATCTCTCGCATCTCcatccccccctccaccccctggAAGCCCCTGAGAcgccccatccctctctccgtCATCATGCGGCTCCAGGGCCCGAGCTGGGCTGCAGCCAACACGGTTTACCCCCACGCCCCCCAGCTCTCCTggaacaaccccccccaccctccactcCTCCAGGACAACCGCCCACCCCCCAGCCCTGAGCAGCAGCCCCCGGAGCTCAGTACGGAAGTGTTGAGCCAGGGAGACAAGGTGGAGGCCGAATCGGTCAGAGACGGGGAGGGAGAGGCCGTAGAGGCGGTTCCTCGGCCCCTCAGCCCAACCCGTCTGCAGCCAGTTCTGGTTCCTATCAGTGAGGAGCTGCCGGACCGCCAGGAGCTGTTACGGATCCGGTCCGAGATCCCGCGGGCGTTGAAGAAGAGGGGCTCGGTGGACCAGTCGGGACCCCCCCAGAAGATGCCCCTGGTGTACCCAGAGCAGTACAAGCAGATCATCAGCAAGCTGTTCCGCAGGAATAAGACCCCCAAGAAGGAGGCCCCGGGCCGCGACGGCAAGTTGGAGCCCAGCTGTGACAGCAACAGCTCCTCCGAGAGCGAGGACATCCCACAGCAGGCCCCCACTTATGCCCCCGCAGCCCAAACGCTGCTGCCAGGACAGTCCCCCACTGCGCAGCTCGCACAGGAGGGCAAGGCTATGCGCTCTATTCTGAAGCGCAGTGGGGGTCGGTCCGGTTCCAGTCCAGAGAGGAAGGCCCGGCTCAGCCCGCTGGTACTGCTGCTGGACGGGGCACTGGTGGGGGAGCTGGACACGGTGCAGAGGGCAGTGCAAGAGATGAGCGACCCCAGCCAGCCCAATGACGAGGGCATCACGGCGCTACACAATGCCATCTGCGGGGGGCACTACCCAGTCGTTGAATTCCTGGTGCGAATTGGAGCCAACACCAGCGCCCCCGACAGCCATAACTGGACCCCGCTACACTGCGCCGCCTCCTGTAATGACCGCACCCTGTGCGAGTTCCTGGTGCGTAGCGGGGCGGCGGTGCTGGCCGTGACCCAGAGCGACGGTGCCACTGCAGCCCAGAAGTGCGACCCCTTCGCCCAGGGGTTCGAGGAATGCGAGAGCTTCCTCAGAGAGGGGGACATGGTGACCATACTGCACAAAGTGGAGGGAGAGGGCTGGTGGTGGGCCTCCTTGTGCGGCAGGGAGGGATACGTCCCCAACAACTACTTTgggCTCTTTCCGAAGGTTCGACCCAAATCCCTGTGCTAAAATAGAACCAGGAGCAGAACCAACCCACATCATCCCTGGACCTGTCAGAGCCGACCCGAACAGCACTGTGGCACTGGGACCATCACCAAACCAGAACGTTTCCACACTGATTACCAACGCACACTCATTCACACTTGCACACACTGACAGTAAGACTCCGACACGGTCACACGCAtccacactgacaaacacacccagacacagacagacgcatacacactctctctcacacacactcactcagacacccaactgtatatatgtatatataagaatTATTTTCAGTAAATACAGAGGTCCCGCTGTCCCTTACCCCTGCAGACAGAGCcctaaatgcacacacatgtatCCCCTTTTGCAAACTGAGCTCCCCCCATCCCTCAACACTGAGAGGCAGTATGGTCTACGGACACAACACCAGGCAGGCGACAGGAGCATGCTGTTTCACCCGCTGATACTCTCACAGATGGTTGGCATGTTTCCATTCCTTTCactgggagggagggggacACTGTTCAGGAAAGGAACAAATTAAGTTCTGTAAATACTCGCAAAAAGtcgtacattttttttttcttgaatgttgttatttttattttatgatcttGATTGAGACTGACACTTGGTGATGccttttgctgttgtttctttttcattactaataattatttctgtgtttgttacAGAGAAGTGACTAGTTTAGCAGTGCTaagggtgggggtgtgtgtctgtgagtgtgtgagtccATGTGTGTGTCcacatttgtgtatatatgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013646 True 3475 mRNA 0.58 12 38382469 38398767

Neighbor

gene id symbol gene type direction distance location
AMCG00013640 NA coding upstream 29307 38345817 ~ 38353162 (+)
AMCG00013638 NA coding upstream 188139 38188374 ~ 38194330 (+)
AMCG00013631 NA coding upstream 260665 38118324 ~ 38121804 (+)
AMCG00013630 LOC101464407 coding upstream 294658 38077005 ~ 38087811 (+)
AMCG00013625 NA coding upstream 328908 38051221 ~ 38053561 (+)
AMCG00013647 napa,LOC108413256,LOC103368726 coding downstream 53022 38451789 ~ 38458783 (+)
AMCG00013648 NA coding downstream 68765 38467532 ~ 38468896 (+)
AMCG00013649 NA coding downstream 78200 38476967 ~ 38478698 (+)
AMCG00013655 NA coding downstream 147561 38546328 ~ 38550955 (+)
AMCG00013656 NA coding downstream 179496 38578263 ~ 38580971 (+)
G45865 NA non-coding upstream 27758 38353914 ~ 38354711 (+)
G45863 NA non-coding upstream 129806 38250027 ~ 38252663 (+)
G45862 NA non-coding upstream 136051 38245956 ~ 38246418 (+)
G45860 NA non-coding upstream 139317 38238539 ~ 38243152 (+)
G45854 NA non-coding upstream 169583 38211090 ~ 38212886 (+)
G45941 NA non-coding downstream 18798 38417565 ~ 38474315 (+)
G45951 bckdha,LOC102788451 non-coding downstream 71287 38470054 ~ 38472706 (+)
G45990 NA non-coding downstream 125945 38524712 ~ 38525412 (+)
G45999 NA non-coding downstream 137761 38536528 ~ 38537058 (+)
G46016 NA non-coding downstream 167882 38566649 ~ 38567319 (+)
G45894 NA other upstream 9271 38370656 ~ 38373198 (+)
G45850 NA other upstream 151139 38230566 ~ 38231330 (+)
AMCG00013629 hnrnpl2,LOC105006371 other upstream 312824 38054897 ~ 38069645 (+)
AMCG00013618 NA other upstream 560894 37818371 ~ 37821575 (+)
AMCG00013616 ccdc9 other upstream 564705 37805207 ~ 37817764 (+)
AMCG00013654 NA other downstream 165722 38564489 ~ 38566281 (+)
AMCG00013665 NA other downstream 246511 38645278 ~ 38673471 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other downstream 257829 38656596 ~ 38707354 (+)
AMCG00013681 NA other downstream 413178 38811945 ~ 38821954 (+)
G46244 NA other downstream 1163206 39561973 ~ 39562300 (+)

Expression


Co-expression Network