AMCG00013683


Basic Information

Item Value
gene id AMCG00013683
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 38831355 ~ 38844099 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013683
ATGTCTTCGAGCGGCGGGCTGTGCTCCGGGGCGCCGCCGCTCCTGTCCCTGTCTTTCTCCGGCTCCGGGTTCCTGGCGGTGTACCAGCTGGGTGCCGCGCAGTGTCTGCTGGACGTGGCGCCCCGGCTCATCCGCTCCGCGCCCAAGGTGTTCGGGGCCTCGGCCGGGTCTCTGGCTGCAGCGGCTGTGGTGTGCGGCTCCAGCATGGAGCGCCTGCGGGACGAAATGGTGGCCACAGCGCAGGAGAGCAGGAAGCACCTGCTGGGCCCCCTGCACCCTTCCTTCAGCCTCTTCAAGCAGCTGGAGTGCTGCCTCCTGCGCAGCCTGCCGGACAACGCCCACGAGCTCGCCGCCGGCCGCCTGCACATCTCCATGACGCGCCTGCAGGATGGACAGAACATCCTGGTGTCCGACTTCCAATCCAAAGATGACCTGGTTCAGCGCTACATTGATGGGGGCTTCACCAACATCCAGCCCATCCAGGACTCCTCCCAGACCCTGACCGTGTGCCCGTTCGCTGGCGAGGCTCTAAATACGGCCTATTACCGGGGATACCAAGATACAATTTTCTTCCTGCAGTCCAATGATCTGATGGAAAATAAGCCTCCTTGGATTCCCAGCGACCCCTGTCTGTCCAGCCTGTGCTCAGACACTTCAATGCAGCATCAGACTGTTCTGTGGGAAGAGGAGCGGGGGCAGGGTGAGGCTGAGAGCGACACGGAGACCCCAGCAGGCCCTGAGGGGAGCCCAGACTCGGCTGAGGAGCGGTGCGATCCGGTGGACGATGTGAGCTGGGATCTGAGCTCCTTGGAGCAGGCTTTCTATCACGGTCTGCCAGCCTGGATACAGGGAGCGTTACTGTGCAACCTAGTGGTACAGCTGGGCCTTGCAGGATTCCAGAACAGCTTTTTCCCAGCCCACCTGCTGTCGTACCTGCTCCTGCCCTACACTCTCCCCATCTTTGTCGTCTTCTCCTTCGGCCAGAAGGTGCTGCGGTGGCTGGAAAACATACCAGAGGAGGTGTTTTGGCTGTGGCAGGATGTCAAGCAGCTCAGCATTGTCCTCACAAACGTTGTGGTCAGGAGCTTTCAGAAGAACCTGGCAGAAAgAATCATCCCCGGGCTCTTCCCGTCCCCTGTGCTGGGGGTCCTGATGGAGCCAGACATCCCCAGCCAGTCTCCCAGTCTCCGTCGGCGCTCAGTTTTACGTCTCCAGCTCTCCACCTCCAGCTCCTCGTTCCCCGAGGACACAGACTCTCACTCCGACGGCAACCCAGACCCGCCAGCCTTCACCTTCCTGCTGAACCTGCAGCTGGAGCTGGACAGCCAGCCTAGGGCAGCCTTAACACGCACCGAGGAAGACTTCCCTCTGGAGTTCAAGGAAAGCCCAGAAGAAGTGCCCAGCTCCCCGAACATCACCCTGCTGGAGTTGGAGGAGGTCGAGGCACCGCAGGAGGCGTACAGTGCCATGTCTTTTGTCCCACAGCAGCTGGAATGCTCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013683 True 1503 mRNA 0.61 8 38831355 38844099

Neighbor

gene id symbol gene type direction distance location
AMCG00013680 rplp2,rpp-2 coding upstream 1787 38826582 ~ 38829568 (+)
AMCG00013682 NA coding upstream 33524 38790875 ~ 38797831 (+)
AMCG00013679 LOC105903253,LOC105026884,LOC106536949 coding upstream 63729 38764988 ~ 38767626 (+)
AMCG00013674 NA coding upstream 82517 38747115 ~ 38748838 (+)
AMCG00013673 NA coding upstream 90316 38738234 ~ 38741039 (+)
AMCG00013692 NA coding downstream 272514 39116613 ~ 39125103 (+)
AMCG00013694 NA coding downstream 326811 39170910 ~ 39177969 (+)
AMCG00013695 LOC105007571 coding downstream 367290 39211389 ~ 39225998 (+)
AMCG00013693 NA coding downstream 383283 39227382 ~ 39233057 (+)
AMCG00013704 ppfia4,LOC107727737,LOC107739270,LOC107656008 coding downstream 434698 39278797 ~ 39279591 (+)
G46035 NA non-coding upstream 210012 38590755 ~ 38621343 (+)
G46034 NA non-coding upstream 241196 38588879 ~ 38590159 (+)
G46016 NA non-coding upstream 264036 38566649 ~ 38567319 (+)
G45999 NA non-coding upstream 294297 38536528 ~ 38537058 (+)
G45990 NA non-coding upstream 305943 38524712 ~ 38525412 (+)
G46138 NA non-coding downstream 90364 38934463 ~ 38939511 (+)
G46355 NA non-coding downstream 1547789 40391888 ~ 40412672 (+)
G46360 NA non-coding downstream 1572533 40416632 ~ 40425507 (+)
G46455 NA non-coding downstream 2038750 40882849 ~ 40885629 (+)
G46508 NA non-coding downstream 2358965 41203064 ~ 41204149 (+)
AMCG00013681 NA other upstream 9401 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 124001 38656596 ~ 38707354 (+)
AMCG00013665 NA other upstream 157884 38645278 ~ 38673471 (+)
AMCG00013654 NA other upstream 265074 38564489 ~ 38566281 (+)
G45894 NA other upstream 458157 38370656 ~ 38373198 (+)
G46244 NA other downstream 717874 39561973 ~ 39562300 (+)
G46345 NA other downstream 1506553 40350652 ~ 40373800 (+)
AMCG00013729 NA other downstream 1533633 40377732 ~ 40389941 (+)
AMCG00013770 NA other downstream 3584002 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 3800888 42644987 ~ 42648754 (+)

Expression


Co-expression Network