AMCG00013693


Basic Information

Item Value
gene id AMCG00013693
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39227382 ~ 39233057 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013693
CTGTGTGTTACTCAGCAGGCCTCTCCAGAGAATGAAAACTGAGAAGAGctgaaaatacagcagccaaAGAGGAACGTATTGTGCGTGTGTTGCCATTTGGGGAGAAGTACTCTGTCAAGTGGATGCAGGTTAAATCTCAGgtGCTACACAGGTTGCTACAAGTTCAAACATGAGACCGGGGCAAGATCTCGGCCATTTCCTCACTCTGGTTAGCTTCCTTTCAGTTTTGACTCCGGGCATCTTCTACACCATTACGCCGCCATCTACAAATGTGACTTCTTTTACCAATGAAACAGCTTTATATAGTACCTCCATCACCCCATATCTACAAGTGAACAGCACAGGGGATGTTTCGACTCCAGCAGCCACAACAGTGTCTCTTACCGTTTCACCCAGCATCAGCAAAGACCCAGAGTCTTCTGCACCAACTGTTACTGGATTCACTGTTACCCCAGATGGTTCCTATGATAATTCCTCATCTACACCAAATGGCACTGTGTCTGCCACTTCCAGTCCTGCCATTTCAACAGTCCCAACCCAGGACACCCACGCAACCACCAGTGCAAACAACACGGCCAATTCCACCCATAGTGAAGCCGCCGCAACAGTGACACCCAGCATCACAACAAGTAGTTCACTGAACAACACCTCTCTGAACACCACCACTATAGATGAACGGCTTAGATTCACCTATTCGGAAAAGGCCCTTACTATTTTCTTCAGCGTTATCCTTGGGGTGGCTGTTCTGGTCTTATTCATGCTGAGCGTtcacaaatgcaaaagaaagaaGACGCAGTACTCACACCGGCCTCTCTACAACAACTCTGATGACACAGTGGACAGATACATGGCATCAGAGGATACCCTAGTGATTTCAGGAGGACTGTATGATGGCCCCAGAATCTACAATCCCAATATGACTGTTTTGGATGAGGATGATGAATTCCCGGTCCCGCCTCCTTTTCACTCCCAAGCCACTGAGTTCCGTCTGGAGTTCTTGCCTGAGGAACGAGAGCGGCCCCCCGAGAGTGGAGTTACTACCTTTGAAACCTTTCAAGCTCCTTCTGGGGAAACTTAAGGCCTTCAAACTGAACATTGACGTGTTActgaacttttatttttttcatctggTTCACTGAACTCAAAAAAGCCTTACACATATACATCATGTGAAGCATCTGTTCAGAAATTATAGAATGCCTATCAAGCCATAggcagatacaaaaaaaaagccctgAAGCCAAAGGGCCAATAGTCTTATCTTTcaatatttctttatatttggAACATAAACTTTGGATTTGTTGTACAATTTAtagatgtaattaataatatttatactaATTAGAGATTTTAGACAggaatgtaatatattttgggaTGAGATGCAGTctcttctactactactacaacttaCACTGTGGCGTATACAATCAAGGTTGGGATCTTTAAACCCTCCCAAGACTACAAACAACATGCATGCATGTTAATGACACACTTATTGGCTTACCATATGCAGGATCACAGAGTCAGGCTCAGTAAATTATTAACTGACAACATCCCATGAACAACACGGAAGGGAGATTTAAACTTACCTCAACTATTGTGTCTTGTACATTTGACTTCACGATGTCTTTCCCAGCCTCCACctgctttgtgtctgtgtctcagggGACTGAAAGCTGCAGTTGGTCAGgcaatttaaagttttaaatacatgctCCAGTTGAGTTCTGttgactgaaatatatttgcTCTGGAAATTCCAGAAATGCACATGGGTATATAACTTGATAATGGTGACTTAGGAAAAGATTCAACCACCAAAGAATATGCATGAATCTGAAttgctttttgcatttttaaaagaactCTCATTAACCTGTGAGATGTTTGGCaatgtgaaaaaaactaaaataaatctcaGAAAAGCACTTAAACTGATTAACATTCAGCACATATTGATCACCTGCATTCAATAATTAATGATCTCAAAGATCCAATGGATCTGAAAGATCACAAGCTTAATTATACATAGATatttaagaataattaaaataaactaaatctatttacatttgctcatgtttatttgtataaaatgttttgttttattttgttttctcaatctGCTTAGCCTGGTGAGAGTTGTGACATGTATAAATAGGTCCCAAactaatatttttgtaaatatttttataccgtttgagtgtgtgtttaaGACTTCTGTCTTAATTTACAAGAATTATTTCCTAGATTAGTTTGTGTTCTtcataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013693 True 2277 mRNA 0.40 4 39227382 39233057

Neighbor

gene id symbol gene type direction distance location
AMCG00013695 LOC105007571 coding upstream 1384 39211389 ~ 39225998 (+)
AMCG00013694 NA coding upstream 49413 39170910 ~ 39177969 (+)
AMCG00013692 NA coding upstream 102279 39116613 ~ 39125103 (+)
AMCG00013683 NA coding upstream 383283 38831355 ~ 38844099 (+)
AMCG00013680 rplp2,rpp-2 coding upstream 397814 38826582 ~ 38829568 (+)
AMCG00013704 ppfia4,LOC107727737,LOC107739270,LOC107656008 coding downstream 45740 39278797 ~ 39279591 (+)
AMCG00013702 NA coding downstream 113833 39346890 ~ 39406693 (+)
AMCG00013708 LOC106566082,LOC105912002,LOC106572854,LOC103367601,LOC105023759,LOC106566400,LOC103022582 coding downstream 296217 39529274 ~ 39540592 (+)
AMCG00013705 NA coding downstream 320902 39553959 ~ 39560813 (+)
AMCG00013707 pfkfb2,LOC108436129 coding downstream 370044 39603101 ~ 39627214 (+)
G46138 NA non-coding upstream 287871 38934463 ~ 38939511 (+)
G46035 NA non-coding upstream 606039 38590755 ~ 38621343 (+)
G46034 NA non-coding upstream 637223 38588879 ~ 38590159 (+)
G46016 NA non-coding upstream 660063 38566649 ~ 38567319 (+)
G45999 NA non-coding upstream 690324 38536528 ~ 38537058 (+)
G46355 NA non-coding downstream 1158831 40391888 ~ 40412672 (+)
G46360 NA non-coding downstream 1183575 40416632 ~ 40425507 (+)
G46455 NA non-coding downstream 1649792 40882849 ~ 40885629 (+)
G46508 NA non-coding downstream 1970007 41203064 ~ 41204149 (+)
G46538 NA non-coding downstream 2180303 41413360 ~ 41413600 (+)
AMCG00013681 NA other upstream 405428 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 520028 38656596 ~ 38707354 (+)
AMCG00013665 NA other upstream 553911 38645278 ~ 38673471 (+)
AMCG00013654 NA other upstream 661101 38564489 ~ 38566281 (+)
G45894 NA other upstream 854184 38370656 ~ 38373198 (+)
G46244 NA other downstream 328916 39561973 ~ 39562300 (+)
G46345 NA other downstream 1117595 40350652 ~ 40373800 (+)
AMCG00013729 NA other downstream 1144675 40377732 ~ 40389941 (+)
AMCG00013770 NA other downstream 3195044 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 3411930 42644987 ~ 42648754 (+)

Expression


Co-expression Network