AMCG00013708 (LOC106566082,LOC105912002,LOC106572854,LOC103367601,LOC105023759,LOC106566400,LOC103022582)


Basic Information

Item Value
gene id AMCG00013708
gene name LOC106566082,LOC105912002,LOC106572854,LOC103367601,LOC105023759,LOC106566400,LOC103022582
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39529274 ~ 39540592 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013708
CCTATTTCAGGTCATCGCATCGCCTTTCATCTCCCCCACAACCACCACGGGAAGCAGTGAGTGGGGTGCATCAGTATTAAAGAGGGGGTCGGCAGACTGATCGTgtcattttgttgctttacGCACCGCCGTTCAAGAGCGTCTCCTGTGTCTGCGGTGTCTCGCTTTTCTCCCCCAGACAGAAGCTCAGTTCTTGAAGGTGACATGAGCCGGGGAAGCAGGGAATCGTCGTAACGATGGACCTTTTAGGTAAATGAAGCCTATTATGATCTATTCCCCGTGTCCTGGATGAAGAtcattgtcttttatttttggaGAGCTCAAAAGAAATGCATCGCAATAATGCTGCACAGGATTACCTTTCAAGATCTACAAGCTAACCTTTAATTTTGCCCCGGACTCCTAACCACGTGTTTTTACGAGCAcagatgtgatttttttcaCCCAAGACGAATCCTGTCCTTagacaggattttaaaaatgtctcttttgtatatttaaaagtgaaacCAACTCAAGTATTACAGGACGGATCACACATGAATGTCTATGTAAAATAACCATTATTATCATTAGCCTATATTTCTGAAGGAGCTCTGTTGGGGATTTTGAGGATGTCTGGGCATCTCTCGCCTTCCCAAGCGCTGTACATAGGCATGGAGGTAGTGATCGCCGTGTCTTCTGTACTTGGCAATGTCATGGTAGTTTGGGCTGTGAAGATCAACCGCTCTTTGAGGGACACCACTTTCTGCTTCATCGTCTCCCTGGCCCTGGCCGATATTGCGGTCGGGGCTCTGGTCATCCCACTGGCCATCACCATCAGCATCGGACTGCAGACCCACTTCTACAGCTGCCTGCTGGTGGCGTGCACGGTGCTCGTCCTGACGCAGAGCTCCATCCTAGCGCTGCTTGCCATTGCCATTGACCGCTACCTTAGGGTCAAAATACCAACCAGCTACAAGACGGTGGTGACGCAGAAGCGGGCGGGTGCAGCGGTGGTGGTCTGCTGGATGGTGTCCTTCATCGTGGGCCTGACACCCATGCTGGGCTGGAACAACCTGGAGAAGATGAAGGAGAATGGCTCCCTCAGCTCAGAGGACCTCACGGTCACCTGCCAGTTCGAGAACGTCATCAGCATGGAGTACATGGTGTACTTCAACTTCTTCGGCTGGGTCCTCCCCCCTCTGCTGCTCATGGTCCTCATTTATCCCATTCTCTTGACTTACGTGGCCATCCTACTGACACACGGCAACTCGGCGGTCAACCCCATAGTGTACGCCTTCCGCATCAAGAAATTCCGAAGAGCCTTTCTCAAAATCTGGAAGCAGTACTTCTGCTGCAAAGAGACGCACCAAGCCAACAACTTTCAGAGCGAGAGGACGGACATCCGTGAGGAGCAGAATGCCATCTAA

Function

NR:

description
PREDICTED: adenosine receptor A1-like

GO:

id name namespace
GO:0001973 G protein-coupled adenosine receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0001609 G protein-coupled adenosine receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013708 True 1412 mRNA 0.50 3 39529274 39540592

Neighbor

gene id symbol gene type direction distance location
AMCG00013702 NA coding upstream 122581 39346890 ~ 39406693 (+)
AMCG00013704 ppfia4,LOC107727737,LOC107739270,LOC107656008 coding upstream 249683 39278797 ~ 39279591 (+)
AMCG00013693 NA coding upstream 296217 39227382 ~ 39233057 (+)
AMCG00013695 LOC105007571 coding upstream 303276 39211389 ~ 39225998 (+)
AMCG00013694 NA coding upstream 351305 39170910 ~ 39177969 (+)
AMCG00013705 NA coding downstream 13367 39553959 ~ 39560813 (+)
AMCG00013707 pfkfb2,LOC108436129 coding downstream 62509 39603101 ~ 39627214 (+)
AMCG00013706 NA coding downstream 92599 39633191 ~ 39640768 (+)
AMCG00013711 NA coding downstream 176375 39716967 ~ 39732114 (+)
AMCG00013712 NA coding downstream 197135 39737727 ~ 39745523 (+)
G46138 NA non-coding upstream 589763 38934463 ~ 38939511 (+)
G46035 NA non-coding upstream 907931 38590755 ~ 38621343 (+)
G46034 NA non-coding upstream 939115 38588879 ~ 38590159 (+)
G46016 NA non-coding upstream 961955 38566649 ~ 38567319 (+)
G45999 NA non-coding upstream 992216 38536528 ~ 38537058 (+)
G46355 NA non-coding downstream 851296 40391888 ~ 40412672 (+)
G46360 NA non-coding downstream 876040 40416632 ~ 40425507 (+)
G46455 NA non-coding downstream 1342257 40882849 ~ 40885629 (+)
G46508 NA non-coding downstream 1662472 41203064 ~ 41204149 (+)
G46538 NA non-coding downstream 1872768 41413360 ~ 41413600 (+)
AMCG00013681 NA other upstream 707320 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 821920 38656596 ~ 38707354 (+)
AMCG00013665 NA other upstream 855803 38645278 ~ 38673471 (+)
AMCG00013654 NA other upstream 962993 38564489 ~ 38566281 (+)
G45894 NA other upstream 1156076 38370656 ~ 38373198 (+)
G46244 NA other downstream 21381 39561973 ~ 39562300 (+)
G46345 NA other downstream 810060 40350652 ~ 40373800 (+)
AMCG00013729 NA other downstream 837140 40377732 ~ 40389941 (+)
AMCG00013770 NA other downstream 2887509 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 3104395 42644987 ~ 42648754 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036443 adora1b coding NC_007119.7 CM002892.2 24122498 ~ 24135171 (-)
grasscarp (Ctenopharyngodon idella) CI01000052_02167466_02172193 ADORA1, ADORA1B coding CI01000052 null 2166584 ~ 2173036 (+)