AMCG00013711


Basic Information

Item Value
gene id AMCG00013711
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39716967 ~ 39732114 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013711
ATGTATCAGGAGCGCCCACGCTATGTGATTGACAGGCCAGCTTACTCCCTCCCGGGATTCGATGAAGACTTCGACAAGAGGAACCGAATTTTTCCCACGGCAGAGAAAGTCAAGAAATTATTCAGGTGTTCGGGGTCCAGGTTGAAAGCCATAGCGTTCTGCCTCTTCCCCATCCTCAGCTGGCTGCCCAAGTACAAAGTGAAGCAAAACCTTCTGGTCGATGTCATCAGTGGGGTCAGCGCTGGCACCATACAGGTCCCGCAAGGTACCTTTGCAGTGCTCAGTATCATGGTTGGAATGGTATGTATGGATCTGGCACCCACTTCTCAATTTGAGCACTACGACGCCACCCTGAATGTCACAGTTCTGAACGAGACTGTGATGAACGAAGTCCGCCTGCATATCTCGGGGACACTGGCCTGTCTCACGGCTCTCATACAGATGGGACTGGGACTGATGCAGTTTGGCTTTGTGGCAATCTACCTATCTGAATCCTTCGTCAGAGGCTTCATGACAGCCGCGGGGCTACAGATCCTCATCTCAGTGCTCAAATATATCTTCGGTATCTATGTGCGCCCGTACAGCGGACCCCTGGCTGTCATCTATACTCTAAGGGATATCTGCCTTGGCCTGCCCAAAACCAATGTGGCGTCTCTGGTGTTTGCTGTGGTCAGCAGCGTGGCCCTCATCCTGGTGAAGGAGATCAGCGCGCGATACCGACATAAGATACCCTTCCCCATCCCCATGGAGATCATCATTGTGGTAGTGGCTACAGCCATTTCTGGCCCCCTGGACATGcctaagaaatacaaaatggacATTGTGGGGCAGATTCCTCTGGGGTTCCCCGCTCCTATTATCCCAGATGTGAGCCAGTGGGGGGATATGATCGGCACGGCCTTCTCTCTCGCCATTGTTGGATATGTGATCAATCTGGCCATGGGGAGGACCCTGGCGGCTAAGTACGGCTACGACGTTGACCCCAACCAGGAGATGTTGGCTCTGGGCTGCAGTAACTTCTTGGGCTCGTTTTTTAAAATCCATGTAATTTGCTGTGCCCTGTCAGTCACACTGGCTGTGGACAGTGCAGGAGGCAGTTCACAGTTCTCTAGTCTCTGTGTGATGCTGGTGGTGATGGTGACAATGCTAGCATTAGGAGCGTTCCTCAAACCACTGCCCAAGAACACCCTCCTCCAACTCTCGGATCCCTACTACCTGTGGAAGAAGAGCAAGCTAGACTGTtgtgtCTGGGTTGTAAGTTTCCTCTCCACATTCTTCCTCAGTCTCCCGTATGGGGTGGCCATTGGAGTGGCCTTCTCTGTGTTGGTGGTGATCTTCCAGACACAGTtCCGAAACGGTTCAGAACTTGGACAGATCTTGGACACAGATCTCTACAAGAACCCTAAGGTGTACAGCAAGGTGAAATATGTTGAAGGGGTGAAGATCGTCAATTACTGCTCTCCTCTGTACTTTGCCAATGCTGAAATATTCCGCAGAAAGGTCATCAAAAAGACAGGGCTGGACCCTGGGAAGATGCTACTTGCCAGGAGGAAATTTCTGAAGAAGCAGCAGCAAGGAATGAGGGAACAAGAAAAGAAGGAGAACCGGAGGAAGAAGAACTCTCTTGTCATTATGAAAAACCAGACCACCTCCCGGCAGGAGCTACAAAATGACTTTGACAGTTCCAGTATCAACAAAATAGAAGGCGGTCTCCCCGCGTCTTATGTCAATTTTAACTGCAGTGTTGTGGACCTGGGAGGAACGAGTTCTGATGACCCAAATGCTCAACCAGTTCAAATTCAGCCCCCTCCCACTCCCTTCCACACCCTGATCCTAGACCTGGCAGGAGTCTGCTTCATAGATCTCATGGGCATCAAAGTGCTGACCAAGGTTTACGAGGAGCTGGAGACAGGAGGGGTGTTTGAAGAGGGCAGCCTGGATCGTAGTCACCTGTTCCTGTCTGTTCACGATGCCATCCTCTTCGCATTGGAA

Function

GO: NA

KEGG:

id description
K14706 SLC26A9; solute carrier family 26 (sulfate anion transporter), member 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013711 True 1992 mRNA 0.51 16 39716967 39732114

Neighbor

gene id symbol gene type direction distance location
AMCG00013706 NA coding upstream 76199 39633191 ~ 39640768 (+)
AMCG00013707 pfkfb2,LOC108436129 coding upstream 89753 39603101 ~ 39627214 (+)
AMCG00013705 NA coding upstream 156154 39553959 ~ 39560813 (+)
AMCG00013708 LOC106566082,LOC105912002,LOC106572854,LOC103367601,LOC105023759,LOC106566400,LOC103022582 coding upstream 176375 39529274 ~ 39540592 (+)
AMCG00013702 NA coding upstream 310274 39346890 ~ 39406693 (+)
AMCG00013712 NA coding downstream 5613 39737727 ~ 39745523 (+)
AMCG00013719 NA coding downstream 21620 39753734 ~ 39754705 (+)
AMCG00013721 NA coding downstream 29066 39761180 ~ 39779054 (+)
AMCG00013724 NA coding downstream 47105 39779219 ~ 39780190 (+)
AMCG00013720 NA coding downstream 57518 39789632 ~ 39897168 (+)
G46138 NA non-coding upstream 777456 38934463 ~ 38939511 (+)
G46035 NA non-coding upstream 1095624 38590755 ~ 38621343 (+)
G46034 NA non-coding upstream 1126808 38588879 ~ 38590159 (+)
G46016 NA non-coding upstream 1149648 38566649 ~ 38567319 (+)
G45999 NA non-coding upstream 1179909 38536528 ~ 38537058 (+)
G46355 NA non-coding downstream 659774 40391888 ~ 40412672 (+)
G46360 NA non-coding downstream 684518 40416632 ~ 40425507 (+)
G46455 NA non-coding downstream 1150735 40882849 ~ 40885629 (+)
G46508 NA non-coding downstream 1470950 41203064 ~ 41204149 (+)
G46538 NA non-coding downstream 1681246 41413360 ~ 41413600 (+)
G46244 NA other upstream 154667 39561973 ~ 39562300 (+)
AMCG00013681 NA other upstream 895013 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 1009613 38656596 ~ 38707354 (+)
AMCG00013665 NA other upstream 1043496 38645278 ~ 38673471 (+)
AMCG00013654 NA other upstream 1150686 38564489 ~ 38566281 (+)
G46345 NA other downstream 618538 40350652 ~ 40373800 (+)
AMCG00013729 NA other downstream 645618 40377732 ~ 40389941 (+)
AMCG00013770 NA other downstream 2695987 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 2912873 42644987 ~ 42648754 (+)
AMCG00013777 NA other downstream 2918076 42650190 ~ 42661844 (+)

Expression


Co-expression Network