AMCG00013712


Basic Information

Item Value
gene id AMCG00013712
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39737727 ~ 39745523 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013712
cacaaacacacccagcCCTGCAACAAGGACACGACATGCACCTCAGTACAGTTTTTGTGGCAGTGTCCCTATTCTTTCATCTAGCGGTGGGCTCCCACTACAAGCTGGTGTGCTATGTGAGTAGCTGGTCCCAGTATCGGCCTGGTGTTGTGCGCTTTACCCCCGACAAGGCGGATCCCTTCCTGTGCTCGCACATCATCTTCGCCTTCGCAGACATTGACGAGAGCTATGTGATCAGAGCGGCGGAGGTGGCTGACGAGGACCTGTACCGCTCACTCAATGTCCTCAAGCAAAGGAATCCAGCTCTCAAAACTCTGCTGTCTGTTGGAGGGTGGAACTTGAATAGCAAGTTGGCTAAGATGGCATCCAAGCATTCCCATCGAACCAAGTTTGTGAGCTCAGTCCTGAGATTCCTGCGATTCCATGGGTTTGACGGCCTGGATGTCGTGTGGCAGGATCCTGGAGCATTTGTGTCTGGCTTGGAGGAGTATGCTAGAGAAGCTTACAACACTCACACCTTCCCACAGTATGCCGACTTCATCAGCTTGATGACCTATGACTTCCAAGGACCATGGCAAAGGGTGACCAGCCACACCAGCCCCCTCTACAGCCACACCCATGACCCCCGGGACCAGGAACTGAACATTAACCACGCTGTGAAGTACTGGCTGTCCCAGGGAGTGGAGCCCAGGAAGCTGATCCTTGGTTTTCCAGCATATTCCCGCACTTTCCAGCTGAAGGGAAACGGGAGTCATGGAATGGGTGTCCCAGCGCAGGAGGGACATGCAGGAAAATACACCAAAACTCCTGGATTCATGGCCTCCTATGAGGTGTGTCAGCTCATTAGGAGTGGCGCTGTAATAAAGTGGGACAGAAAGCAGAAGGTGCCCTATGCCATCAAAGGCAATCAGTGGGTCGGGTTTGATGATGGACACAGCCTGAGGAAGAAGACAGAGTGGCTGAGACGCCAGGGTCTGGGGGGTGCCATGGTGTGGTCTATGGACCTGGATGACTTCACTGGCACTCTGTGCAAGCATGGCACCTTCCCCCTCATCCGGCTGCTGAAGAAATCCCTTCTGGCCAGACACAGAGGATACCACCATCACAAGCTGGGAGCGAGCCATGCAAGCTGGCGCAAAGGACACCAAGCAGTCAAACACTCTGCATccatctcctctctgtctcctttTGCCTTTCTTAAAACACACTAGACTGGGACACCTACTTCCCCACCTTTTGCTTCCTTCCCCACTGTAGTGTTAATTCCTGTAACCTGTCTATGTATCTGCACGGAGATTACTATGTGTTAAGCTGATAGAAAtgaaagaatacattaatacaacaaATGCAAATTATGGGGCATGGCTTTTGTTTAAAACTGACACAATATCCTCATTGACACTTATGAATTTGATGCCATTATATTCTACACTTCACCATCAATAAAAGGTGCATTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013712 True 1459 mRNA 0.51 10 39737727 39745523

Neighbor

gene id symbol gene type direction distance location
AMCG00013711 NA coding upstream 5613 39716967 ~ 39732114 (+)
AMCG00013706 NA coding upstream 96959 39633191 ~ 39640768 (+)
AMCG00013707 pfkfb2,LOC108436129 coding upstream 110513 39603101 ~ 39627214 (+)
AMCG00013705 NA coding upstream 176914 39553959 ~ 39560813 (+)
AMCG00013708 LOC106566082,LOC105912002,LOC106572854,LOC103367601,LOC105023759,LOC106566400,LOC103022582 coding upstream 197135 39529274 ~ 39540592 (+)
AMCG00013719 NA coding downstream 8211 39753734 ~ 39754705 (+)
AMCG00013721 NA coding downstream 15657 39761180 ~ 39779054 (+)
AMCG00013724 NA coding downstream 33696 39779219 ~ 39780190 (+)
AMCG00013720 NA coding downstream 44109 39789632 ~ 39897168 (+)
AMCG00013725 plxna2,LOC108425528,LOC103385266,LOC106567158,LOC107594012 coding downstream 366271 40111794 ~ 40120125 (+)
G46138 NA non-coding upstream 798216 38934463 ~ 38939511 (+)
G46035 NA non-coding upstream 1116384 38590755 ~ 38621343 (+)
G46034 NA non-coding upstream 1147568 38588879 ~ 38590159 (+)
G46016 NA non-coding upstream 1170408 38566649 ~ 38567319 (+)
G45999 NA non-coding upstream 1200669 38536528 ~ 38537058 (+)
G46355 NA non-coding downstream 646365 40391888 ~ 40412672 (+)
G46360 NA non-coding downstream 671109 40416632 ~ 40425507 (+)
G46455 NA non-coding downstream 1137326 40882849 ~ 40885629 (+)
G46508 NA non-coding downstream 1457541 41203064 ~ 41204149 (+)
G46538 NA non-coding downstream 1667837 41413360 ~ 41413600 (+)
G46244 NA other upstream 175427 39561973 ~ 39562300 (+)
AMCG00013681 NA other upstream 915773 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 1030373 38656596 ~ 38707354 (+)
AMCG00013665 NA other upstream 1064256 38645278 ~ 38673471 (+)
AMCG00013654 NA other upstream 1171446 38564489 ~ 38566281 (+)
G46345 NA other downstream 605129 40350652 ~ 40373800 (+)
AMCG00013729 NA other downstream 632209 40377732 ~ 40389941 (+)
AMCG00013770 NA other downstream 2682578 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 2899464 42644987 ~ 42648754 (+)
AMCG00013777 NA other downstream 2904667 42650190 ~ 42661844 (+)

Expression


Co-expression Network