AMCG00013719


Basic Information

Item Value
gene id AMCG00013719
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39753734 ~ 39754705 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013719
ATGGATCTGCGGGACCTACTGAAGGTGCTCACCACACTGGCCCAGAATACGATCGGTATCCCGGCCAACCTCGCCGTACTGCTGGTGTTTGTCCACATCGCCCGAGCTGAGCACCGGCTCCTGCCTGCCGACATCATCGTCTCCCAGCTGGTTTTCGTCAACCTGGTACTGATCCTGAGCCGGGGCATCCCTCAGAGCCTCTCTGCGTTGGACTACAGAGGCTCCTACAACAGGGCCACATGCAAATTCCTCATCTTCACCTACCGCACAACCCGTGCCATGTCCATCTCCCTTACCTTCCTGCTGAGCGCCTACCAGGGCATCACCatcaccccctcctcctcccgtcTGTACAGCCTGAAGCCTTGGCTCTCGCGCTGCCTGCTGCCCCTCAGCCTCTTCTTCTGGCTTCTAGATGGGGGTACTTCCTACTCCAGCATCCTCTACACCAGCCAGATCCATAATGTCACGTTCAGTGCACTCACACTCAACCTGGGCTACTGCCTGGTTGAGTTTCCTAGTGAGGAGTCCTACTTCGCCAACGGAGTCATGTACCTTGCCCGGGACACATGCTTCATCCTTCTCATGGTGCTCTCCAGCCTCTATATCCTTTTCATTCTCTACCAGCACCGTAAGAGAGCGAAGGGAATCCGCAGCTCTGTCCAGAGTCAGGGCTCATCGGCCGAGAATCGGGCGGCTAAGACTGTGGTCACCCTGGTCACCCTGTACGTTGTATTTTTTGGGATTGACAACCTGATTTGGGCATACACTGTTACCATTGGGAAAGTGCCAGTGGTCATGAATGACGTGCGTGTTTTCTTCTCCACTCTCTATGCCACTGTCTGCCCGGTAGTCGTGATCGTTTCCAACAGGAAGGTGAACCGGAAGCTTCGATGTGACAAGTCTGCACAAGACTCTCAGTCAAAAGAAACCACTATTTCCACTGTCTCGGTCAAGTTCCCCACATTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013719 True 972 mRNA 0.55 1 39753734 39754705

Neighbor

gene id symbol gene type direction distance location
AMCG00013712 NA coding upstream 8211 39737727 ~ 39745523 (+)
AMCG00013711 NA coding upstream 21620 39716967 ~ 39732114 (+)
AMCG00013706 NA coding upstream 112966 39633191 ~ 39640768 (+)
AMCG00013707 pfkfb2,LOC108436129 coding upstream 126520 39603101 ~ 39627214 (+)
AMCG00013705 NA coding upstream 192921 39553959 ~ 39560813 (+)
AMCG00013721 NA coding downstream 6475 39761180 ~ 39779054 (+)
AMCG00013724 NA coding downstream 24514 39779219 ~ 39780190 (+)
AMCG00013720 NA coding downstream 34927 39789632 ~ 39897168 (+)
AMCG00013725 plxna2,LOC108425528,LOC103385266,LOC106567158,LOC107594012 coding downstream 357089 40111794 ~ 40120125 (+)
AMCG00013727 LOC106567158,LOC108425528,LOC103366170 coding downstream 429230 40183935 ~ 40271437 (+)
G46138 NA non-coding upstream 814223 38934463 ~ 38939511 (+)
G46035 NA non-coding upstream 1132391 38590755 ~ 38621343 (+)
G46034 NA non-coding upstream 1163575 38588879 ~ 38590159 (+)
G46016 NA non-coding upstream 1186415 38566649 ~ 38567319 (+)
G45999 NA non-coding upstream 1216676 38536528 ~ 38537058 (+)
G46355 NA non-coding downstream 637183 40391888 ~ 40412672 (+)
G46360 NA non-coding downstream 661927 40416632 ~ 40425507 (+)
G46455 NA non-coding downstream 1128144 40882849 ~ 40885629 (+)
G46508 NA non-coding downstream 1448359 41203064 ~ 41204149 (+)
G46538 NA non-coding downstream 1658655 41413360 ~ 41413600 (+)
G46244 NA other upstream 191434 39561973 ~ 39562300 (+)
AMCG00013681 NA other upstream 931780 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 1046380 38656596 ~ 38707354 (+)
AMCG00013665 NA other upstream 1080263 38645278 ~ 38673471 (+)
AMCG00013654 NA other upstream 1187453 38564489 ~ 38566281 (+)
G46345 NA other downstream 595947 40350652 ~ 40373800 (+)
AMCG00013729 NA other downstream 623027 40377732 ~ 40389941 (+)
AMCG00013770 NA other downstream 2673396 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 2890282 42644987 ~ 42648754 (+)
AMCG00013777 NA other downstream 2895485 42650190 ~ 42661844 (+)

Expression


Co-expression Network