AMCG00013720


Basic Information

Item Value
gene id AMCG00013720
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 39789632 ~ 39897168 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013720
ATGACTCCATTGGCcatgaatgccttgaagccggGGAATGCCATAATACAGAACTCCAAGTTCAGGGTGTACTCTGGCCTGTGGGATTCCACGGCACAGGACCACCACCAGGTAGACAAACGCCAGCTTGCTCAGGATGAGGTCATTGGGGAGAAGCCGGCCATCAGACAGACGCAGATGGAAGTGCGTCTTGTGCTGAAGGCAGCTGGCTTCATCTGTCTGGATGTGGTGGGCATCCCAGGGAACCTGACCGTACTCCTGTTCTTCTGCTACCTGCGTCTGTCTGATGGCCGGCTTCTCCCCAATGACGTCATCCTGAGCAAGCTGGCGTTTGTCAACCTGGTGGTGGTCCTGTGCCGTGGAATCCCACAGGCCTTAACTGCACTTGGCATCCAGAACCTCTTTGGGGAATATGGCTGCAAAGTGGTCATCTTCACATACCGAATAGGCCGTGCCATGTCCATCTGTATCACCTCCCTCCTCAGCTGCTACCAATGCATAGTCATCGCCCCTGGATCAACACGGTGGATGGTGCTGAAGCAGAGGGTCCCCAGAAGCATCCCCCTGATCATCTTGCTGCTCTACGGGCTGAATTTTATGTTGTGCCCTGCTGGATTTGTCTATGCTTCAACAGTTCCCAACTCCACCATCCCAGAGTACACCCTGAACTTGGAGTTCTGTATTGTGGCATTCCctggcttcaaggcattcatgGCCAATGGAGTCATGCATATAATTcgtgattttgtgtttgtgggcATCATGGCTGGTGCAGCCATTTATATTGTCCAGATTCTTTACCACCATAGGAAGCAGATGAGGGGCATGCATGGCTCGGATCGGAACCAGAAAAAAACGGCAGAGGCGTCCAAGTCATTGCTCATACTTGTGGCCATGTATGTCATCCTGTTTGGCCTGGACAATGGCAGGACAAAGAGCCATGACAGGGATACAGTACCGAGGGAGGGCAACTGTGGCACTACACAGTCGGTGGATGATAGAGCAAGAGGCCGAATGCCCGATGACCACCACCAGGTTGACAAACGCCAGCTTGCTCAGGATGAGGTCGTTGGGGAGAAGCCGGCCATCGGACAGACGCAGGTAGCAGAAGAACAGGAGCACGGTCAGGTTCCCTGGGATGCCCACCACGTCCAGACAGATGAAGCCAGCTGCCTTCACCACAAGACGCACTTCCATCTTCTAGAGAAACTAGTCCAGCAAAATTGTGGTAGGGGCCTGTGGGATTCCACGGCACAGGACTACCACCAGGTTGACAAACGCCAGCTTGCTCAGGATGAGGTCATTGGGCAGAAGCCGGCCATCGGACAGACGCAGGTAGCAGAAGAACAGGAGCACGtttgtgaTCAACAATCCCAGGGCATCTTGAAGGACGATGCCCGTGGCCGGCCCGGGTTCCACGATCTCAGAGGGCTGGGTCAGGGCGCTGCCAAGAAACAGCAGGAAGAGTTCGGCATTGACATCACGAACATTGAAAGGAGCAAGTATGTATCAAAAGTCTTGTTTTCTGCTATACACTATGACACCTACTTCACAACCCTGTGGAATCAGGACAATGTAGAAGCCTGCACCAGCCATGATGCCCACAAAGACAAAATCACGAAGTATGACCACCACCAGGTTGACAAACGCCAGCTTGATCAGGATGAGGTCGTTGGGGAGAAGCCGGCCCTCAGACAGACGCAGGTAGTAGAAGAACAGGAGCACGGTCAGGTTCCCTGGGATGCCCACCACGTCCAGACAGATGAAGCCAGCTGCCTTCAGCACAAGACGCACTTCCATCTTCTAAAGAAACTGACCTGCAATAGTCCAGCAAATTGTGATAAGGATGAGGatctctctcacacagcacTGGTATTCTCCATTCTGCCTCTGGCTATGAATTCGCAGGCCATCATCAGAGGGGTGCTATACCTGACCCTGACATTGCTGGGGGTGCCAGGCAACCTGTTGGTGATGTGGGCATTCTGCCATTTGGCCCTCTGCGACCGTAAGCTGCTGCCAGCTGACGCCATCGTTCTGCACCTGGCCAGTGTTAACTTCCTGGTGGTGGCGGTGCGCTGCTTCCTGGAGATGCTGGCAGCCTTCAGCATCGCCAACGTCTTCAATGACACCGGCTGCAAGAGCGTCATTTTCATCTACAGGACGTCCCGTGCGCTCTCCATCTGGCTGACCTGCGTGTTGAGCGGCTTCCAGTGTGTCAGCATCGCCCCCCCGGGGTCCCGCTGGTCAGGCGTCAAAACACATGCTCCTCGTTACCTAGGGGGcatcttcctcttcctctgggTGCTGAACACCAGCATCAGCTCTCCCTCCGTGGTTTTCTCCATGGGCTCCCACAATGACTCCACCCAGATGGAGCACAGCATCAACGTGGAGTTCTGCTTCGTCCGCTTCCCCAGCAGTACAGTGAAGCAAGCTAATGGGGCGGTGCAAGTGGTCCGGGACGTGGTGCCCATCTTCCTCATGGTCCTAGCCAGCCTCTTTATCCTGGTCTTCCTGTATCGGCACAGCCAGCAGGTCAAGAGCATCCGTAGCGCCAAGCAGAACCAGAAGCAGTCGGCCGAGACGCGGGCAGCCAAAACGGTGGTGACCCTGGTGACACTGTACGTGCTGTTCTACGGTATTGACAATGTGCTGTGGATCTACACGCTGACCGTTACCCAGACCATGAGCTCCTCCCTCGTCTCTGACCTGCGCATCTTCTTCTCTTCCTTGTACGCTGCCGTCAGTCCCATCATCATCATCGCCTCTAACAAGAAGGTAAACAGCCGGCTCACCTGTGTGAGACCCGAGAAGGGCCCCCAGAGCATGGACACAACTCTCTCCACGCTCTga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013720 True 2856 mRNA 0.55 12 39789632 39897168

Neighbor

gene id symbol gene type direction distance location
AMCG00013724 NA coding upstream 9442 39779219 ~ 39780190 (+)
AMCG00013721 NA coding upstream 10578 39761180 ~ 39779054 (+)
AMCG00013719 NA coding upstream 34927 39753734 ~ 39754705 (+)
AMCG00013712 NA coding upstream 44109 39737727 ~ 39745523 (+)
AMCG00013711 NA coding upstream 57518 39716967 ~ 39732114 (+)
AMCG00013725 plxna2,LOC108425528,LOC103385266,LOC106567158,LOC107594012 coding downstream 214626 40111794 ~ 40120125 (+)
AMCG00013727 LOC106567158,LOC108425528,LOC103366170 coding downstream 286767 40183935 ~ 40271437 (+)
AMCG00013726 NA coding downstream 430730 40327898 ~ 40341318 (+)
AMCG00013728 NA coding downstream 548481 40445649 ~ 40467813 (+)
AMCG00013734 magi3,LOC103386588,LOC104962253 coding downstream 577857 40475025 ~ 40478788 (+)
G46138 NA non-coding upstream 850121 38934463 ~ 38939511 (+)
G46035 NA non-coding upstream 1168289 38590755 ~ 38621343 (+)
G46034 NA non-coding upstream 1199473 38588879 ~ 38590159 (+)
G46016 NA non-coding upstream 1222313 38566649 ~ 38567319 (+)
G45999 NA non-coding upstream 1252574 38536528 ~ 38537058 (+)
G46355 NA non-coding downstream 494720 40391888 ~ 40412672 (+)
G46360 NA non-coding downstream 519464 40416632 ~ 40425507 (+)
G46455 NA non-coding downstream 985681 40882849 ~ 40885629 (+)
G46508 NA non-coding downstream 1305896 41203064 ~ 41204149 (+)
G46538 NA non-coding downstream 1516192 41413360 ~ 41413600 (+)
G46244 NA other upstream 227332 39561973 ~ 39562300 (+)
AMCG00013681 NA other upstream 967678 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 1082278 38656596 ~ 38707354 (+)
AMCG00013665 NA other upstream 1116161 38645278 ~ 38673471 (+)
AMCG00013654 NA other upstream 1223351 38564489 ~ 38566281 (+)
G46345 NA other downstream 453484 40350652 ~ 40373800 (+)
AMCG00013729 NA other downstream 480564 40377732 ~ 40389941 (+)
AMCG00013770 NA other downstream 2530933 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 2747819 42644987 ~ 42648754 (+)
AMCG00013777 NA other downstream 2753022 42650190 ~ 42661844 (+)

Expression


Co-expression Network