AMCG00013734 (magi3,LOC103386588,LOC104962253)


Basic Information

Item Value
gene id AMCG00013734
gene name magi3,LOC103386588,LOC104962253
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 40475025 ~ 40478788 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013734
ATGTCCAAGAcgctgaagaagaagaagcactGGTCCAGCAAAGTGCAGGAGTGCGCCGTGTCCTGGGGCAGCGCCGGGGACTTCGGCTCCGTGGTGGAGGTGCTGGGGGGAGCGGAGCGCGGCGAGTTCCCGCACCTGGGCCAGGTGAAGCTGGAGGCGGTGCTGTGCCAGGCCGGGAAGCTGCCCGGCCCGGGGGACGTCCTGCTGGAGGTCAACGGCACCCCGGTCAGCGGGCTGACGAACCGCGACACGCTGGCGGTCATCCGGCACTTCCGAGAGCCCATCCGCCTGAAGACCGTTAAGCCAGCGACCCCAGTTGAGATGCAAGGAGAAGCCGTGTAA

Function

symbol description
magi3 Predicted to enable frizzled binding activity. Predicted to be involved in signal transduction. Predicted to act upstream of or within positive regulation of JUN kinase activity. Located in cell junction.

NR:

description
PREDICTED: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform X2

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013734 True 342 mRNA 0.67 2 40475025 40478788

Neighbor

gene id symbol gene type direction distance location
AMCG00013728 NA coding upstream 7212 40445649 ~ 40467813 (+)
AMCG00013726 NA coding upstream 133707 40327898 ~ 40341318 (+)
AMCG00013727 LOC106567158,LOC108425528,LOC103366170 coding upstream 203588 40183935 ~ 40271437 (+)
AMCG00013725 plxna2,LOC108425528,LOC103385266,LOC106567158,LOC107594012 coding upstream 354900 40111794 ~ 40120125 (+)
AMCG00013720 NA coding upstream 577857 39789632 ~ 39897168 (+)
AMCG00013731 magi3 coding downstream 76889 40555677 ~ 40604675 (+)
AMCG00013735 NA coding downstream 132048 40610836 ~ 40622089 (+)
AMCG00013736 NA coding downstream 184797 40663585 ~ 40665746 (+)
AMCG00013739 pim1,LOC105889771,LOC107734527,LOC107598956 coding downstream 366924 40845712 ~ 40850185 (+)
AMCG00013740 LOC106925460,LOC103149628 coding downstream 553304 41032092 ~ 41036684 (+)
G46360 NA non-coding upstream 49518 40416632 ~ 40425507 (+)
G46355 NA non-coding upstream 62353 40391888 ~ 40412672 (+)
G46138 NA non-coding upstream 1535514 38934463 ~ 38939511 (+)
G46035 NA non-coding upstream 1853682 38590755 ~ 38621343 (+)
G46034 NA non-coding upstream 1884866 38588879 ~ 38590159 (+)
G46455 NA non-coding downstream 404061 40882849 ~ 40885629 (+)
G46508 NA non-coding downstream 724276 41203064 ~ 41204149 (+)
G46538 NA non-coding downstream 934572 41413360 ~ 41413600 (+)
G46652 NA non-coding downstream 1366520 41845308 ~ 41893174 (+)
G46701 NA non-coding downstream 2016958 42495746 ~ 42499599 (+)
AMCG00013729 NA other upstream 85084 40377732 ~ 40389941 (+)
G46345 NA other upstream 101225 40350652 ~ 40373800 (+)
G46244 NA other upstream 912725 39561973 ~ 39562300 (+)
AMCG00013681 NA other upstream 1653071 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 1767671 38656596 ~ 38707354 (+)
AMCG00013770 NA other downstream 1949313 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 2166199 42644987 ~ 42648754 (+)
AMCG00013777 NA other downstream 2171402 42650190 ~ 42661844 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other downstream 2561196 43039984 ~ 43044436 (+)
G46862 NA other downstream 2608501 43087289 ~ 43089643 (+)

Expression


Co-expression Network