AMCG00013753


Basic Information

Item Value
gene id AMCG00013753
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 41467032 ~ 41483376 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013753
GCGCATAGGTAAATTACAGCTCCACACACAGATAACAGAAGTCATGTGACCTCTCTCAGCCGTGCAGGGTAAAGGTAGATTTACAGTGCCAGTGGATTTGGATTATGGAGGATTGCTGAAAAACACTCAAGTAACGGTCTGGtctgggtatatatatatatatatatatttgtatgttttggtAACTCTTCTGTTTTAAGACTTGACTCGGAGAAGACGCAGACATGTCGTTCAGTCGGAAGAATTGGTCTGCGCTTTCAAGTCTAACTCGCCAGTGGACGGTTGAGGATGAGGAGGAAGTTGAGCgtgagaggaggagaaggattAGAAACAGCACTGTATTTGATCCCTCTGACTCAAGCCAAGATGACACAGCCCCGCAACCAAACAGTGCTGGGGACGACTCTGGTACTGAAGACCAAACCAACTTGGAATTTCTAGAGATTCTGAAGTCGAGGGATGAGCGGAGGAAGAAGAGACACGTGGAGACACTTTGGCAGCAACGAGAGGAGGAGATGCCGGAAATGGGTCAGGAAGCTGAGGACAAGGGGCAAGAGGACAGGCTGGGGGGAAAGGAACTGAAGGCTGAGACACAGAGGTGTGAGCTGAGGAACTCCACTACATCAGTCAAAAACAGCaATGGAAATGTTGAGTCCAAGACCAACCAAGAAACAGACAAAGAGTCCCCGAGCAGATCATCTAAGGTTTTCAAGAGCTCGCTCTCCTTCTCTTTAGATAAGACCCCCACGTCCCCCACTGGAAGAGTCATCTCCCCCTTGAGTCCCACCAGCCCACCAGGGCAGGGATTGACACACAGCCCAAGGTGGTCCCAGGAGATAAGAGAGAATGGAGACAACCAGtttacGAGAAGCTCTGAGCAGCCTGGGGAGAGTCCAATCAAGCATCAGAGCCCCAGATCCTCCTCTTTCAGGataaagacaaagacagagGAGACAACTGTTCCAGTCAAGAGGAGTGCCAGTGTCAGAATGACTTCAAGGACCATCGAAGACAAACTCAGCAAGGCACCAAACCACGAAGACGACAAACCCTCCCCGTTTCAAAGAAACTCCAGACAAAGAATTTCCTCTCGCACCATTGAGGAGAAACTGGAGAGACTAGCTATGGCAGCGCAGaaatcCGAAACTCTAAAGTCTTCTGTTCAGAAAGACTTCTACCTGCTGGTGGACGAAGTGGCAAGGAAAAGAGGGGACTTCAGGAATGTCGACATCTCCAGCCAGCGAAACATCTGGGAGAGCAAAACTGAGGAGCTTCCTCCAAAACCCTCATCTTATAATAAAGTCCAGAAGTAGTGCCCCCACCCTGTTTTAGTAAGTGCTAAAGACTGCCCATTCAAGCTCTGGATATATTACTCAACTAATGAGAAGATGTGTACCTTATTTACTCATGGTTTATGTTTGTACTATATGAACAAAACTTTACACAACATCAAAGTAACTCAGGCACTGGTAGTCTTCTGGTACATATTaaggaaagcaattaaaattattctagTCTcatcacaaaaatatgaatgagacacccatgtgtgttttttgtatttttttttctttgacattttcttttaaatactgCTCTTAACTGTCTTTTATGCATAGTCTATTTTAAatctattctttatttttatttttggtgtatGTATCTTGTCTTGcaggacatttttttattaatttgtgaagAAACATGCAAACATTTCCAGCAGTCAGAAATCCAGTGTTCAGGGTTTATCAATGTGGTCTTTTCATTATTACATGGTACTGCTATATCTGTGGTCAAGATCTGTAACAGAGGttgtaattcaaattattatttgcagGTTGAATTAGCAAACTCAATGTACTGCTTATTAGGGGATAATTATGAATAGACAAGCTTTGCATTCAGTATGACttcatgatttttaaacatgcttATTTGTGTTTCCTCCAGAATCCTGTTCTTTACAATGGTGCCCATCTAGGTTTAAACATTAAACCAATTTTTCTATAGCTGTGCATGGTTCTATTTTTTTCGTTTGCAAATTAACTTCCTGTTTTTAACTGGTATTGTCACATAATAAACCATCATTTGAAACAAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013753 True 2101 mRNA 0.42 12 41467032 41483376

Neighbor

gene id symbol gene type direction distance location
AMCG00013754 LOC107559161 coding upstream 4076 41453187 ~ 41462956 (+)
AMCG00013757 csrp1,LOC107385034,LOC102222871,LOC103134604,LOC106921008 coding upstream 42697 41416140 ~ 41424335 (+)
AMCG00013746 NA coding upstream 269369 41176661 ~ 41197663 (+)
AMCG00013744 tead3,LOC103355928,LOC101066377,LOC108231638 coding upstream 295093 41154019 ~ 41171939 (+)
AMCG00013745 LOC105889845,LOC107724511,LOC107595435,LOC107665997 coding upstream 332367 41130711 ~ 41134665 (+)
AMCG00013758 NA coding downstream 936 41484312 ~ 41504467 (+)
AMCG00013760 NA coding downstream 66050 41549426 ~ 41552570 (+)
AMCG00013756 NA coding downstream 90602 41573978 ~ 41587939 (+)
AMCG00013755 NA coding downstream 111441 41594817 ~ 41604943 (+)
AMCG00013759 NA coding downstream 138388 41621764 ~ 41637225 (+)
G46538 NA non-coding upstream 53432 41413360 ~ 41413600 (+)
G46508 NA non-coding upstream 262883 41203064 ~ 41204149 (+)
G46455 NA non-coding upstream 581403 40882849 ~ 40885629 (+)
G46360 NA non-coding upstream 1041525 40416632 ~ 40425507 (+)
G46355 NA non-coding upstream 1054360 40391888 ~ 40412672 (+)
G46652 NA non-coding downstream 361932 41845308 ~ 41893174 (+)
G46701 NA non-coding downstream 1012370 42495746 ~ 42499599 (+)
G46730 NA non-coding downstream 1208830 42692206 ~ 42692546 (+)
G46734 NA non-coding downstream 1210286 42693662 ~ 42695623 (+)
G46739 NA non-coding downstream 1220280 42703656 ~ 42792219 (+)
AMCG00013729 NA other upstream 1077091 40377732 ~ 40389941 (+)
G46345 NA other upstream 1093232 40350652 ~ 40373800 (+)
G46244 NA other upstream 1904732 39561973 ~ 39562300 (+)
AMCG00013681 NA other upstream 2645078 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 2759678 38656596 ~ 38707354 (+)
AMCG00013770 NA other downstream 944725 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 1161611 42644987 ~ 42648754 (+)
AMCG00013777 NA other downstream 1166814 42650190 ~ 42661844 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other downstream 1556608 43039984 ~ 43044436 (+)
G46862 NA other downstream 1603913 43087289 ~ 43089643 (+)

Expression


Co-expression Network