AMCG00013756


Basic Information

Item Value
gene id AMCG00013756
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 41573978 ~ 41587939 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013756
ATGATGCTTCAGTCCATTTTCACAGTCACCCTGAGCTGTGGGCTTGGGGAAGACTCTGCTGGCTGGGAGTATCTCTggtacagagacacacagggaacaGCACTGCCCAACACTGACAGCAGCAGGACTGATGGGTCCAGTTACGCCATCAGCCAGGCGGCTCTGTCCCACACTCTACCACAGCCTGTCCTGACCCTGGAGTCTGGATGGACAGAGATATTCACCACAGAAAGAGTGACTCTGAAATGTGAGATTCAGGGCAGCTCTACTGAGTGGATCTATAAATGGTACAGAGATGGACAGGAGCTTCCTGTTGACAAGACTGACTCCAGCAGTAGAGATGGAGACAGATACAAAATCCTCAATGCTGCTCTGTCTCACACTCGACCTCAGGCTGTCCTGACCCTGGAGTCTGAATGGACAGAGATGTTCACCACAGAAAGAGTGACTCTGAGGTGTGAGATTCAGGGCAGCTCTACTGAGTGGATCTATAAATGGTACAGAGATGGACAGGAGCTTCCTGTTGACAAGGCTGACCCCAGCAGTAGGGATggagagaaatataaaattCTCTTTGCTGCTCCGTCCGACAGTGGGCAATATACCTGTAGAGGGCAACATAAGAGAAAGTACATCTACACTAGAGACAGCCATCCTGTTACACTGAAGGTATCTGCTACCAGCCCAAAGCCCCTCCTGACCCTGGACCCCCCCAGTGCAGAGATATACACAGGAGACAGAGTCACCCTGAGCTGTGGGCTTGGGGGAGACTCTGCTGGCTGGGAGTATCTCTggtacagagacacacagggaacaGCACTGCCCAACACTGACAGCAGCAGGACTGATGGGTCCAGTTACACCATCAGCCAGACGGCTGTGTCCCACAGTGGACAGTACTGGTGTCGAGCTACAAGGGGCAGGGTGTCCTTTCACTCTCAGTACAGTGATGCTCTGACATTAGACATATTAGCTCGACCTCAGGCTGTGCTGACCCTGCAGTCTGGATGGACAGAGATGTTCACCACAGAAAATGTGACTCTGAGGTGTGAGGTTCGGGGCAGTGATATAGAGTGGAACTACACATGGTACAGAGATGGACAGGAGATTTCTCAAGACAGCACTAAAGTCAGTAGTGGGACGAGAGAAAGATACGAATTCAATTCTGCAGTTGAATCACAGAAAACGGAATTCAGCTGCAGAGGGGAAAGGACAACCAAACCAACTTACTCTTTAAAGAGTGACATTCTTGTACCAAGAGATATCAAACCGAAGAGGAAACCACAAGATGACCTGTTTTTTACAAGAgcagaaatgaaaatcaaagaCCCAGATTTACATGACCAGCTGAACAAAGGTACCGACTCTCCCACTGAAACCAAAAGTAGTCCACAAACTTCAGAGGAAGCTGAATTGCAATCAATCATCAATTCAAACCAAGTTGCTGGGGAAAACATTGAAGAGAATATGCAGATGCTTTCTTCATTCACAGGATCATGAGGAACAATATCTTATTGCACCATGAAATGtgacatgaaaatgaaagaaatattttaaatgagactATCATCTATCAAGGCAATGTGGATTTTCTCACTTACTTTTTGTTAAATTTCATCAATCCCCAACTGTAAGACTATTCTTTAATGGTGGATTTGCCAAATGTGACTTCAGTCTAATCCATGATGATTTACCATGATGTATGGAAATTATGATTTGCAAACTGGTAGGTGGTTCAATGTGTTAATATTATCCAGgaattaatttcttattttgcttttcaaaatgccaTGTTTGCATAATGAACAGAATGTAGTTGAGCAgcctatatttaaataaacactttaaaatatagtttgtaAATAAAGAACTGCTTGAACGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013756 True 1883 mRNA 0.45 10 41573978 41587939

Neighbor

gene id symbol gene type direction distance location
AMCG00013760 NA coding upstream 21408 41549426 ~ 41552570 (+)
AMCG00013758 NA coding upstream 69511 41484312 ~ 41504467 (+)
AMCG00013753 NA coding upstream 90602 41467032 ~ 41483376 (+)
AMCG00013754 LOC107559161 coding upstream 111022 41453187 ~ 41462956 (+)
AMCG00013757 csrp1,LOC107385034,LOC102222871,LOC103134604,LOC106921008 coding upstream 149643 41416140 ~ 41424335 (+)
AMCG00013755 NA coding downstream 6878 41594817 ~ 41604943 (+)
AMCG00013759 NA coding downstream 33825 41621764 ~ 41637225 (+)
AMCG00013761 NA coding downstream 176805 41764744 ~ 41787394 (+)
AMCG00013771 nudt3,LOC106566013 coding downstream 889732 42477671 ~ 42487364 (+)
AMCG00013774 pacsin1b coding downstream 967869 42555808 ~ 42569579 (+)
G46538 NA non-coding upstream 160378 41413360 ~ 41413600 (+)
G46508 NA non-coding upstream 369829 41203064 ~ 41204149 (+)
G46455 NA non-coding upstream 688349 40882849 ~ 40885629 (+)
G46360 NA non-coding upstream 1148471 40416632 ~ 40425507 (+)
G46355 NA non-coding upstream 1161306 40391888 ~ 40412672 (+)
G46652 NA non-coding downstream 257369 41845308 ~ 41893174 (+)
G46701 NA non-coding downstream 907807 42495746 ~ 42499599 (+)
G46730 NA non-coding downstream 1104267 42692206 ~ 42692546 (+)
G46734 NA non-coding downstream 1105723 42693662 ~ 42695623 (+)
G46739 NA non-coding downstream 1115717 42703656 ~ 42792219 (+)
AMCG00013729 NA other upstream 1184037 40377732 ~ 40389941 (+)
G46345 NA other upstream 1200178 40350652 ~ 40373800 (+)
G46244 NA other upstream 2011678 39561973 ~ 39562300 (+)
AMCG00013681 NA other upstream 2752024 38811945 ~ 38821954 (+)
AMCG00013672 h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC107572204 other upstream 2866624 38656596 ~ 38707354 (+)
AMCG00013770 NA other downstream 840162 42428101 ~ 42446480 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other downstream 1057048 42644987 ~ 42648754 (+)
AMCG00013777 NA other downstream 1062251 42650190 ~ 42661844 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other downstream 1452045 43039984 ~ 43044436 (+)
G46862 NA other downstream 1499350 43087289 ~ 43089643 (+)

Expression


Co-expression Network