AMCG00013807


Basic Information

Item Value
gene id AMCG00013807
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 43425955 ~ 43431338 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013807
GCTGATTTTAATTGGGAAAGTAACAGTGGGACTAAAAGGCCAAGCCCGTCAACAAGACAGAAAATACGCTTTATGATAGGAACCCCTGACGTCACTTAGCTCTGTCCCAAAATGGGCTGTTTGCGCTCAAAAGGGTGTCACCCATCTTCTCCTATTAGTGATAGGAGCCGAGGAGCGCACAGCTGGGACTCACTGAGCATCCCACACAGGAGAGGTACAGGAGGCTAAGGACACAGTTTGGGATCTGGAGACATCAAAAACATCACTGATTGGAGACGAAGAGGCAGATTCCCTCAGTGATTTCCTAGGTCTCTAATAAGGAGCTGATCTGGACTTAATGCCAAAAGCTGCAGCATGGAGCTGAAGGTGTGGGTTGAAAGTGTCCAGAGGGTGATCTGTGGGGTATCTGAGAAAACCACCTGCCAGGAAGTGGTCATCGCACTGGCACAGGCTATGGGTCGCCCAGGCCGGTATACTTTGAAAGAAAAGTTCAAGGAGTTCGAGCGCAACGTCTCCCCCGACGAGAAGCTCTTGGAGTCCTTGAATAAATACGGGCAGCAGGCCAGCGAGGTGCAGCTCATTCTGAACCACAACGGGCCATCTCTAGCCGGGCCGAGGTCATGTGCTCAGCTGCGGGGGCCACGGGGTGCTGACCAGAGTGCACACCGGCAGAGCCTGCCTCCTCTCGTCCGGCTCCGCATCAAGACGGACCTCCAGTCCGACAACAAGAAACCGAAACGCAAGTCGCTTACATTTGCCGAGGAGGCTAGGGAATGGATTGAGTCCTTCAGCAGGACAAGGCTGCACAGGGTCAGGGGCAAGAACAAAGACAACAGGAAGAGGGACTCCACTCTGAGCCAGCATGAAGAAATACAGGAGCCCATCCTCCTCTTCCAGAAGACCCCTGACCAGTCAGTGAGAACAGCAGAGCCAATCTCGGGACAAGATGCAGAGGAGAAACAGATGGAAGAGCTCCACAGACTACTCAGCCAGCAACAAACCCAGCTCATGGCCCTCCAGTCCCAGTTGGACACAACAGAGGCACAGATCGAGGCCTTGGAGGAGCAAGAGCAGCTGAGACAGGAGGCAGAACAGCTTGAAGTGCTCATTGCATCACAGCAGGCCGAGGCGGAGGAGCTGGAGTTCTGGGAGAATGAGCTGAGAGCAGAGGAAGGCTACGAGACAGACCTGCAGGAGCAATTCCTGGAGATGAAGCAGAAAGCGTCGGAGTGTAAGGGGAAGCTGGAGGAGTACAAGAAGCGACTCCAAGGCCTGGACATAGCCAGAGATTCCCAAGCCCACCTGGACTACGAGCTGTCTGAAGAGTTGGCCCTGAGCAGGATGGAGACGAGCCAGCTAGAGGCCAACCTTGCCATGTCCAAGGAATCCCTGCGAGAGGCCAACCAGGAACTGCAGGTCGGTCCACCCCCCTGGGGGAAGATTCTTTCCGATACACCGAAAAGCTTGCCTTTCCCGTATCGGTTCAGTGACACGAGTTGCGGCCCAGGGCAGCTGAGGGAGTGGTTGACTCGGTGGTCCAAAGCCCAGGCTTCAGGGGTGCCCAACCCTGAAGAAGATAAACAATGGGGTAGCACCAGGGTGTAGAAGAGGGACAACTCTACTGACCGCAACAGAGAAATTACAGACTCCATCCTTCTCTTACAGAAGAAACACGGAGAGCTTGACGTCTTGACCGTGGGACTCCTGCACACCAACTCGAAGCACTTCATCTCAGACTCTGGGCCTTGCAGCTCTGCCTTTCTGTGTCACAAATCTTTAGCACACCTTTAGCACTGGCTTATGAGAGGCATTTGCAAAGATCCAGATAGACAGTGAAAGCGAGGGGCGTTGGAGGATTGTTTGTTACCCCCGAATTATCCAGGAACACCActgtaaaaggaaaaatagGGGAGGCCCACCTTTTAATTGGTCAAATTAAGATTGCATTGGGTATTGATCCTATCCAAGATAAACTGATCGCATGAAATTCTTTTACAGATCAAACACTAAGTCTACCACGTGGATCCAAAACAAATCCACCTCTTGCCCGAGAAGGTCTGTTCATATTATCTCCTAAGAGAAATGAGTCAACTTCCAGACAATTGATGGGGACCTGAACGCACATTACATTTACACCGCACTGGTTGACTTTGGGGAACTAAACAACTGTTGTATCTTGTCCATAAAATGGTCAATCCTGGTTTTTAGTAATTATTAAAGACAAGACTTTTTCATAACCAAACATCCACTAATGTTTATTCCAGAACCAACAAGAGACTTTAAACCCAGAGGCAGTTGGCAGTAAGCACAATTCACCCTGGTTTATGTGCTTCTGCAAAAACACTGGATCAAGCATCTGTAACGGGAGACTGGAGCATACCTTTCCAGTAACTTGAGATTTACAAAGCAGTACCTACACTCTTACAGTTTGCCTGTGAAGTGATTGCTTTTGCAAGCTGATGGGTTATGtatgctattaaaataaaaaacctgatTGAGGTGTTTAGCATTTCTGCTGCACAGATCATGTTCATTCCATTGGACACCAGTTCATGTTCAATGGTTTTTGCATACTGTATTAATGGTTCAATTTAAATATCTCctcaattataaaaatattttagaacacccttattgttttcatgcacaatttgatatacatactgtaccatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013807 True 2674 mRNA 0.49 3 43425955 43431338

Neighbor

gene id symbol gene type direction distance location
AMCG00013803 NA coding upstream 143951 43279131 ~ 43282004 (+)
AMCG00013799 NA coding upstream 317319 43104134 ~ 43108636 (+)
AMCG00013791 adipor1 coding upstream 356034 43065336 ~ 43069921 (+)
AMCG00013787 NA coding upstream 479616 42937001 ~ 42946339 (+)
AMCG00013786 scube3,LOC106566910 coding upstream 489812 42893266 ~ 42936143 (+)
AMCG00013811 NA coding downstream 39119 43470457 ~ 43487228 (+)
AMCG00013812 NA coding downstream 59448 43490786 ~ 43514457 (+)
AMCG00013815 NA coding downstream 163103 43594441 ~ 43607562 (+)
AMCG00013817 NA coding downstream 186713 43618051 ~ 43620709 (+)
AMCG00013821 NA coding downstream 199130 43630468 ~ 43631598 (+)
G46905 NA non-coding upstream 73540 43350853 ~ 43352415 (+)
G46861 NA non-coding upstream 339355 43086390 ~ 43086600 (+)
G46814 NA non-coding upstream 426820 42998739 ~ 42999135 (+)
G46798 NA non-coding upstream 445716 42977612 ~ 42980239 (+)
G46739 NA non-coding upstream 633736 42703656 ~ 42792219 (+)
G46940 NA non-coding downstream 1038 43432376 ~ 43452015 (+)
G46941 NA non-coding downstream 10159 43441497 ~ 43443296 (+)
G46949 NA non-coding downstream 31433 43462771 ~ 43464006 (+)
G47032 NA non-coding downstream 269586 43700924 ~ 43712011 (+)
G47040 NA non-coding downstream 488331 43919669 ~ 43919967 (+)
G46862 NA other upstream 336312 43087289 ~ 43089643 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other upstream 381519 43039984 ~ 43044436 (+)
AMCG00013777 NA other upstream 764111 42650190 ~ 42661844 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other upstream 777201 42644987 ~ 42648754 (+)
AMCG00013770 NA other upstream 979475 42428101 ~ 42446480 (+)
G46945 NA other downstream 7154 43438492 ~ 43440698 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other downstream 1603434 45034772 ~ 45095669 (+)
G47206 NA other downstream 1895320 45326658 ~ 45360882 (+)
AMCG00013872 NA other downstream 2385034 45816372 ~ 45823228 (+)
G47398 NA other downstream 2503321 45934659 ~ 45941906 (+)

Expression


Co-expression Network