AMCG00013812


Basic Information

Item Value
gene id AMCG00013812
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 43490786 ~ 43514457 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013812
GACACCAACTGTAGGAAATACTCCCACAGCCTCAGTAGAGGCTGTGTGAAGTCGGCTAACAGAAGAGTGACTGCGACTGAAGGTGGAAGTGTAGTTAAATGTTCATATCAGGATGGTTATCAGTCCTATGTGAAGTACTGGTGTTGTGATCCCTGTGGGAATAAGGATGTTCTCATTAAAACAGACACTGTTGTTACAGCAGGGAGATTCACCCTCACTAACAATGTCTCAGCGACTGTTAGGATGACCGGACTGACACTGCAGGATTCTGGGGAGTATTACTGTGGAGTGGAGAAATGGGGCTACGACATATTAGAAAAAATACACTTAGTAAAGcTCCCACAGTCTCCATTTTGTCCACCCCTGGACCTAAGAGTGACTGGGGCTGAAGGTGGACGTGTAGAGATTAAGTGTCCATATCAGGATGGTTATCAGTACCGTGTGAAGTACTGGTGTCGTGATTCCTGTGGGAATAAAGATGTTCTCATTAGAACTGGCAAGGCAGACACTGTTGTTACTGCAGGGAGATTCTACCTGATTAACTCTGTCTCAGCAAAGACCTTTACTGTGTGGATGAACAGACTGACACTGCAGGATTCTGGGGTCTATTACTGCGGAGTGGAGGATTGGGGCAAAGacacattaacaaaaatacactTGAGCGTCATTGAAGGTTGTGTGCAGTCAAGAAGAGTGACGGGGGTTGAAGGTGGACGTGTAGAGATTAACTGTACATATGAGGATGGTTATCAATACTATGTGAAGTATTGGTGTCGTGAACCCTGTGAGAATAAGGATGTTCTCATTAATTCTGTCCAGGCAGACATTACTGTTACAGCAGGGAGATTCACCCTCACTAACTATGTCTCAGCAATGATCTTTACTGTGTGGATGACCAGACTGACACTGCAGGATGCTGGAATCTATTACTGCGGAGTTGAGAAATGGGGCAAAGACATATATGGGGAAATACACTTGATCATCAGTAAAGcTCCCACAGTCTCCATTTTGTCCACCCCTGGACCTGTGACTGTAGAGACCACAGTTACTGTCACACCAACAACAGAGATCTCCACCCAGGCTGAATACATGAAAGAAGATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013812 True 1104 mRNA 0.45 7 43490786 43514457

Neighbor

gene id symbol gene type direction distance location
AMCG00013811 NA coding upstream 3558 43470457 ~ 43487228 (+)
AMCG00013807 NA coding upstream 59448 43425955 ~ 43431338 (+)
AMCG00013803 NA coding upstream 208782 43279131 ~ 43282004 (+)
AMCG00013799 NA coding upstream 382150 43104134 ~ 43108636 (+)
AMCG00013791 adipor1 coding upstream 420865 43065336 ~ 43069921 (+)
AMCG00013815 NA coding downstream 79984 43594441 ~ 43607562 (+)
AMCG00013817 NA coding downstream 103594 43618051 ~ 43620709 (+)
AMCG00013821 NA coding downstream 116011 43630468 ~ 43631598 (+)
AMCG00013816 NA coding downstream 142770 43657227 ~ 43668484 (+)
AMCG00013818 NA coding downstream 157776 43672233 ~ 43675241 (+)
G46949 NA non-coding upstream 26780 43462771 ~ 43464006 (+)
G46940 NA non-coding upstream 38771 43432376 ~ 43452015 (+)
G46941 NA non-coding upstream 47490 43441497 ~ 43443296 (+)
G46905 NA non-coding upstream 138371 43350853 ~ 43352415 (+)
G46861 NA non-coding upstream 404186 43086390 ~ 43086600 (+)
G47032 NA non-coding downstream 186467 43700924 ~ 43712011 (+)
G47040 NA non-coding downstream 405212 43919669 ~ 43919967 (+)
G47080 NA non-coding downstream 707951 44222408 ~ 44223401 (+)
G47106 NA non-coding downstream 774600 44289057 ~ 44291796 (+)
G47107 NA non-coding downstream 783812 44298269 ~ 44298664 (+)
G46945 NA other upstream 50088 43438492 ~ 43440698 (+)
G46862 NA other upstream 401143 43087289 ~ 43089643 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other upstream 446350 43039984 ~ 43044436 (+)
AMCG00013777 NA other upstream 828942 42650190 ~ 42661844 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other upstream 842032 42644987 ~ 42648754 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other downstream 1520315 45034772 ~ 45095669 (+)
G47206 NA other downstream 1812201 45326658 ~ 45360882 (+)
AMCG00013872 NA other downstream 2301915 45816372 ~ 45823228 (+)
G47398 NA other downstream 2420202 45934659 ~ 45941906 (+)
AMCG00013879 dennd2d other downstream 2429114 45943571 ~ 45959194 (+)

Expression


Co-expression Network