AMCG00013816


Basic Information

Item Value
gene id AMCG00013816
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 43657227 ~ 43668484 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013816
GCGCGGTCTGGCAGCGGGCAGAGTACACCTCCACCGCCGCGGAGCAGCGCCGCCATgCACTCCTGACACCGTAAGTTATTCCCAATTCTCACACCGAGGACTGACTCCTGAAGCTCTGACATGGAAACTAAAGATGAGACAAGTGACACAGACAGCGGGATCATCCTGCAGTCTGGCCCAGACAGCCCCTCTTCCCCTGTGAAGGACCTGACCACACACACGAGGGCCGTCAAACTCCGCCACAAGTCCCTGGAGGACCGCCTGGAGCTGTGCCTGCTGGAGCTGAAGAAACTATGCATCCGAGAGGCCGAGTTGACCGGGCACCTCTCCAAGGACTACCCGCTGCTGCCTGGAGAGAAGCCGCCACACATCCGCCGGCGGATTGGAGCTGCCTTCAAACTAGACGAGCAGAGCATCCTGCAGGGGGGCGAGGACCCCGAGCTCAGGTCCCTGGAGGCCGATCTGGCCCTGCAGCTGCAGATCTATGAGGCGGCGCGCAGGCTGTCACTGGAGGAGCACCTGAGCAAGCCGGTGAAGAGGAGCCGTCTGCAGCAGGTCAAGCGCGAGGAGAGGAAGGTGAAGGAGCTGCAGGGGGCCGTGTTCCAGCTGCGCCTGCGTCATGGCCGCGCCTCCCCGTGCCGTGCCGGCACCCCTCCGCAACAGAGAGACCCCCCACCGACTCACCTAGCAGTCCCCCTCCAGGCCAGGCAGGGCTCCCCCCTGCCCTCCCGCCACAGCCCCAGACCAACCCCCCCCAAGACCCTGGAGGGCCTGCATCCGGGCTACATCCCTGTGGAGTATGAACGCTGCCCCATCCAGAACTCCCCCTGGAAGGAGTCCAGCCTCGACCAGCCATACCAGAAGCCGAAGAAGACCCATTCGGCATGCAGCAGCCAGTCCAGTAGTCCTGCTGTGACCCCCGTGTCAACCCCAGTGGACCCACGCCTGGGAGAGACTGCCCTTCCATTCCAGTTTACGCCCATCAAGAACCTGGCGCTGCACCATAACCACTCCAGTAGTGCCCCCTCCACCCCTGAGTTGGCCGGCCGGAGACCACACTCTCAGTCATTCAGGGTCCCCAACACCAATCCTCCCCAAGACCCCAACCAAAACCGAGGCCGTGCCCGGCAACCCATGAGACGTTTGATTGATTTCACGGTGACCTCTCCAGAGTACTCCCCCCAGAGAGGCACCCTCGGAAACCCCCTGTACCAGTCAAGCTCCGAGGACAGTAATTCAGAGTACTCTGTGCCCTCCTACACCAGCTCCCCCAGCCATGAGATGGTGTCTGAACTGGCCAAGCCCTGTCCCCCTCCTTACCCAGGCTACCACGGTGGGCACTACCCCGCTCACCAAAACGGGCACCACGGTGGGTATCCTGCCTTCAGCGGCCCGGGTTACTACAGGAACATCCAGCACCAGTCCTCGCCCAACTTCCACCGGGGGTACGTGGATGAGGGGGTGGGCTTCTCTCCAGAGCTGGACATGGGGCGGCTATATGTGGGACCCCCACCGCCCCACCACCTCCACTGGGACCAACGGGACGGCTGGTACGAGGAGATGCCCCCTCGCCGCATCTCAAGGCCCCTCCCCGCCCACGTTAAGCTCTCTCGCGCCCCCTCACTCAAGGAgtacccccaccaccaccccagcATCAGCCGGGCCCTGCCCCGAGAGGTAGTGTCGGAAGAGCTGAAGTCCTGGCACCAGCGCAACCAATTCAGGGGAGGCCGGCCCCACTCGCTGGACCGGCAGGGGGCTGTCCGCCTGCGTAGCGCCCCGGGGAGGGAGTCCCCACTTTCCCTGCAGCACAACTTCCACCCGCAGGTACGCCATGCAGCTGGGAGCCCGCTGTGGgccggggagggggggagggctTGGCATTTGCCAGTCCAATCTGAGACCAGAGTTTACACCACTTTCACGTACAGAGACCCTTATTTCTCACTTCATGGATACTAAATGGGTCGTTTTGTCCACAGTGGACAATTGGGCTCTGTGGATTCCTCCCATATACAAAATACCAAATGTTTGTGgtgcaatatatttaaatgcatataattttgttaattattctTACTTATTAAtcgttaattttgtttttgcacacaCCCCTTCCTTGTGAAAGGTGAGCACAATCTGTTCCCTGTGGGTATAATCTGAAACCCAGGCAGGGTTAACCTTAGAAAAATAGAATGAGGGCATGGGGGCAAAGGTGGGAgacctttttaaatatgttaaaagaatCCAGAGCATTGGTGCCAAACGGAGCCCAATGTTTACATGAACACTGAGCAGAAGAATAGGATTATTGAGGAAGTGGTGATGTTCGCTGACTGTGAAGGATTCTGTGATGTGGTTCACCTGTCTGAAGTCACACTCAACACGGACTGGGACTGAGCATCCGCATGGAGAGACACGCTGTAGATGATGCATATCTTAGCAGGAAATCAGACGTGAGAAACCAATTGTCAACAgtgtttccaaaacaaaattgtgtaaATGATGTGGATTTTAGAGTATATAGAGCACAATAGTGAAAAATGGGAGGGTAGTTTTAGAGGGACATGCAGAGTAATTATTTTCCAAGTAGAGAGTGTGTATAGCTGTTACACAGGAAAAGGGTTTACCTGACtcgtatatatatttaaagaaaaggttttGTTAAATGGTAGAAAGCCCCCCTAACTTGCCTAATCACTTGACGTTCAACTCTGTCTTTTGATTGACACCATACATCCAACTGTAAATAGACAAGAACAATCACTGCAACTGTGTATCTATTATCATgaacattaaattgtgttttgtcaCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013816 True 2816 mRNA 0.56 8 43657227 43668484

Neighbor

gene id symbol gene type direction distance location
AMCG00013821 NA coding upstream 25629 43630468 ~ 43631598 (+)
AMCG00013817 NA coding upstream 36518 43618051 ~ 43620709 (+)
AMCG00013815 NA coding upstream 49665 43594441 ~ 43607562 (+)
AMCG00013812 NA coding upstream 142770 43490786 ~ 43514457 (+)
AMCG00013811 NA coding upstream 169999 43470457 ~ 43487228 (+)
AMCG00013818 NA coding downstream 3749 43672233 ~ 43675241 (+)
AMCG00013824 NA coding downstream 18868 43687352 ~ 43696325 (+)
AMCG00013826 NA coding downstream 435687 44104171 ~ 44123031 (+)
AMCG00013827 rhoc,rhocb,LOC106582735,LOC105908082,LOC107668165,LOC108271788,LOC108427591,LOC107679717,LOC107569805 coding downstream 476987 44145471 ~ 44150277 (+)
AMCG00013829 NA coding downstream 534930 44203414 ~ 44221190 (+)
G46949 NA non-coding upstream 193221 43462771 ~ 43464006 (+)
G46940 NA non-coding upstream 205212 43432376 ~ 43452015 (+)
G46941 NA non-coding upstream 213931 43441497 ~ 43443296 (+)
G46905 NA non-coding upstream 304812 43350853 ~ 43352415 (+)
G46861 NA non-coding upstream 570627 43086390 ~ 43086600 (+)
G47032 NA non-coding downstream 32440 43700924 ~ 43712011 (+)
G47040 NA non-coding downstream 251185 43919669 ~ 43919967 (+)
G47080 NA non-coding downstream 553924 44222408 ~ 44223401 (+)
G47106 NA non-coding downstream 620573 44289057 ~ 44291796 (+)
G47107 NA non-coding downstream 629785 44298269 ~ 44298664 (+)
G46945 NA other upstream 216529 43438492 ~ 43440698 (+)
G46862 NA other upstream 567584 43087289 ~ 43089643 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other upstream 612791 43039984 ~ 43044436 (+)
AMCG00013777 NA other upstream 995383 42650190 ~ 42661844 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other upstream 1008473 42644987 ~ 42648754 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other downstream 1366288 45034772 ~ 45095669 (+)
G47206 NA other downstream 1658174 45326658 ~ 45360882 (+)
AMCG00013872 NA other downstream 2147888 45816372 ~ 45823228 (+)
G47398 NA other downstream 2266175 45934659 ~ 45941906 (+)
AMCG00013879 dennd2d other downstream 2275087 45943571 ~ 45959194 (+)

Expression


Co-expression Network