AMCG00013834


Basic Information

Item Value
gene id AMCG00013834
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 44635479 ~ 44661638 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013834
ATGGTGCCAAAGACGATTGCGGGGAAGATATTTGGATCCATCTGCTCTCTGAGTGGGGTGTTGGTAATAGCCCTTCCTGTCCCTGTCATCGTGTCCAACTTTAGCCGAATTTATCACCAGAACCAGAGAGCAGATAAACGCCGGGCGCAGAAGTTACagAAAGCCAGGCTGGCCAGAATACGAGTGGCAAAGACTGGGAGCTGCAATGCGTTCCTTCACAGCAAGAGAAACGGACTCCTCAATGAAGCCTTAGAGCTCACAGGCTCCacggaggaggagcagcagctgAGCAAATCCACCTCCATCATAGAAAGCCAACACCACCACCTACTGCACTGCCTGGAGAAGACCACAAACCATGAGTTTGTGGACGAGCAGATCTTTGAGCAGAACTGCCTGGAGAGCAGCCTGCAGAACTACCCCTCCCGCAGCCCGTCCCTCTCCAGCCACCATGGCCTCACCAGCTCCTGCTGCTCCCGCCGCGCCAAGAAGACCACCCACCTGCCCAACTCCAGCGTGCCCGCCACCCGCCTGCGCAGCCTGCAGGAGCTCAGTGCCATCCACATCCAGTGCGGGCAGCAGCCCCCGCTGAGCACCAGTCGCTCGAGTCTCAATATGAAGTCGGATGAGACCATCGGACTGAACTGCAAGAGCTCCCAGATCACCACTGCGATCATCAGCATCCCAACACCGCCGGCCACCACCCCTGAGGGCGAGGGCAACAACCACCCCTCCAGCCCCAACCGTCACCTCATGGGCAGCTCGAACATTGTCAAGGTGTCTGCGCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013834 True 792 mRNA 0.58 5 44635479 44661638

Neighbor

gene id symbol gene type direction distance location
AMCG00013833 kcnd3,LOC101073956,LOC102776651,LOC102303593 coding upstream 104652 44529718 ~ 44530827 (+)
AMCG00013829 NA coding upstream 414289 44203414 ~ 44221190 (+)
AMCG00013827 rhoc,rhocb,LOC106582735,LOC105908082,LOC107668165,LOC108271788,LOC108427591,LOC107679717,LOC107569805 coding upstream 485202 44145471 ~ 44150277 (+)
AMCG00013826 NA coding upstream 512448 44104171 ~ 44123031 (+)
AMCG00013824 NA coding upstream 939154 43687352 ~ 43696325 (+)
AMCG00013837 NA coding downstream 34141 44695779 ~ 44696771 (+)
AMCG00013839 NA coding downstream 239394 44901032 ~ 44919261 (+)
AMCG00013840 LOC104957825,LOC107725284 coding downstream 271662 44933300 ~ 44940161 (+)
AMCG00013841 LOC101476397 coding downstream 684969 45346607 ~ 45353929 (+)
AMCG00013849 kif21b coding downstream 758275 45419913 ~ 45431617 (+)
G47110 NA non-coding upstream 305932 44329293 ~ 44329547 (+)
G47107 NA non-coding upstream 336815 44298269 ~ 44298664 (+)
G47106 NA non-coding upstream 343683 44289057 ~ 44291796 (+)
G47080 NA non-coding upstream 412078 44222408 ~ 44223401 (+)
G47040 NA non-coding upstream 715512 43919669 ~ 43919967 (+)
G47158 NA non-coding downstream 299971 44961609 ~ 44963472 (+)
G47184 NA non-coding downstream 606416 45268054 ~ 45268386 (+)
G47186 NA non-coding downstream 618116 45279754 ~ 45281095 (+)
G47188 NA non-coding downstream 621754 45283392 ~ 45283600 (+)
G47189 NA non-coding downstream 622202 45283840 ~ 45284159 (+)
G46945 NA other upstream 1194781 43438492 ~ 43440698 (+)
G46862 NA other upstream 1545836 43087289 ~ 43089643 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other upstream 1591043 43039984 ~ 43044436 (+)
AMCG00013777 NA other upstream 1973635 42650190 ~ 42661844 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other upstream 1986725 42644987 ~ 42648754 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other downstream 373134 45034772 ~ 45095669 (+)
G47206 NA other downstream 665020 45326658 ~ 45360882 (+)
AMCG00013872 NA other downstream 1154734 45816372 ~ 45823228 (+)
G47398 NA other downstream 1273021 45934659 ~ 45941906 (+)
AMCG00013879 dennd2d other downstream 1281933 45943571 ~ 45959194 (+)

Expression


Co-expression Network