AMCG00013837


Basic Information

Item Value
gene id AMCG00013837
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 44695779 ~ 44696771 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013837
ATGAAGGAGGCTGGGGACGGGCTGCATGCTCAGATGAATTGCATGATGGGAGCTCTGCAGGAACTGAAATTACTCCAGGTGCAGACAGCGTTGGAACAGCTGGAGATATCGGGACGCGCCAGCCAGGGAGGCCCAGCCCCCAGCTCAGCCCCTCCACCACCCACTGAGGTGCACCATCCAGCTGCCAGGCCCAATCGCAGGGAAGACCGTCGAGTCCTCAGAGGGAGCAGTTTAGAGACGTCCCCTTCTTCCTCCAGCCCTGAGTCGGGAATCTTCCATTGTCCCAAGAGGTACTCGAGACAGGACCCCCCGAAGGAAGACTTCAGAGGTCACCGGCTAAGCACCCCCATAGAGCAATGTCCTCCAGGCCCTGCTGTGGATCTGCCGGGGATCCTGCACAGCCTCTCGCGAGAGGGGCCCTCCGTGGACACCGAGCCGTCCCCCGACAGCATGGAGGACTCCAATGACTGGACGTCCTCTTTGATGTGCCAGAGCCGCAACCGACAGCCGCTCGTCCTGGGCGACAACGTCTTCGCCGACCTGGTGGGGAACTGGCTGGACCTTCCGGAGCTGGAGAATAAATCTTCAGAGGAAGAAGGGGGTGCGGAGGATTTGGAGGATGCTCACCCTTTGAGATTGACCCGCTCGCAAGAGATCTGCAGGAAGTTCTCCCTGACTGCCAACATCTTTAAGAAGTTCCTCCGCAGCGTCCGCCCAGACAAGGACAAGCTACTCAAGGAGAAGCCAGGCTGGCTGCCTCTGGACGACCCCGAGACAGAGCTGTCCAAGAGGCCCAAGAAAGCAGTCAAACCCAAGGGAAGCTTCTATTTTCCTTTCAGACCCGGCATGCAGGGCAAAGGGAGACCATGTCCCAGGGCTGTGGAGGAGAGGAGCCACCCAAGAGCTGGGATTTATATTGGCAGGGGTGGCCAGTCGGAGGTCGTAGATAAAGCACAACCAGTGTTTGATTACAACACAGCTGTTTGGGTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013837 True 993 mRNA 0.59 1 44695779 44696771

Neighbor

gene id symbol gene type direction distance location
AMCG00013834 NA coding upstream 34141 44635479 ~ 44661638 (+)
AMCG00013833 kcnd3,LOC101073956,LOC102776651,LOC102303593 coding upstream 164952 44529718 ~ 44530827 (+)
AMCG00013829 NA coding upstream 474589 44203414 ~ 44221190 (+)
AMCG00013827 rhoc,rhocb,LOC106582735,LOC105908082,LOC107668165,LOC108271788,LOC108427591,LOC107679717,LOC107569805 coding upstream 545502 44145471 ~ 44150277 (+)
AMCG00013826 NA coding upstream 572748 44104171 ~ 44123031 (+)
AMCG00013839 NA coding downstream 204261 44901032 ~ 44919261 (+)
AMCG00013840 LOC104957825,LOC107725284 coding downstream 236529 44933300 ~ 44940161 (+)
AMCG00013841 LOC101476397 coding downstream 649836 45346607 ~ 45353929 (+)
AMCG00013849 kif21b coding downstream 723142 45419913 ~ 45431617 (+)
AMCG00013848 LOC106582687 coding downstream 746315 45443086 ~ 45456185 (+)
G47110 NA non-coding upstream 366232 44329293 ~ 44329547 (+)
G47107 NA non-coding upstream 397115 44298269 ~ 44298664 (+)
G47106 NA non-coding upstream 403983 44289057 ~ 44291796 (+)
G47080 NA non-coding upstream 472378 44222408 ~ 44223401 (+)
G47040 NA non-coding upstream 775812 43919669 ~ 43919967 (+)
G47158 NA non-coding downstream 264838 44961609 ~ 44963472 (+)
G47184 NA non-coding downstream 571283 45268054 ~ 45268386 (+)
G47186 NA non-coding downstream 582983 45279754 ~ 45281095 (+)
G47188 NA non-coding downstream 586621 45283392 ~ 45283600 (+)
G47189 NA non-coding downstream 587069 45283840 ~ 45284159 (+)
G46945 NA other upstream 1255081 43438492 ~ 43440698 (+)
G46862 NA other upstream 1606136 43087289 ~ 43089643 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other upstream 1651343 43039984 ~ 43044436 (+)
AMCG00013777 NA other upstream 2033935 42650190 ~ 42661844 (+)
G46723 cunh6orf106,zgc:101577,LOC107696455,LOC107579776,LOC107724532,LOC107595408 other upstream 2047025 42644987 ~ 42648754 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other downstream 338001 45034772 ~ 45095669 (+)
G47206 NA other downstream 629887 45326658 ~ 45360882 (+)
AMCG00013872 NA other downstream 1119601 45816372 ~ 45823228 (+)
G47398 NA other downstream 1237888 45934659 ~ 45941906 (+)
AMCG00013879 dennd2d other downstream 1246800 45943571 ~ 45959194 (+)

Expression


Co-expression Network