AMCG00013864


Basic Information

Item Value
gene id AMCG00013864
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45695635 ~ 45702773 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013864
ATCGGACGCCGCTGTCGTCACACGCCGGGCTGCAGGGGGCGTGGCCAGCGTGCAGGGACCCGGAAGCGGAAGCACATGGTGGCGGCCCGGCGTGCGCGTCCATTCATTCGCGGGTTTGGATCCGAGAGAGCGGAGAGACACGGGGACAGCATCCGTGCAGCAGAATCGACACGGTCCCGGTGAAGGGCGATCGGAGAGAAGCGGCTGCCAGTGGGAATCGGACGAGCTGCCTTTCCGTCCGTATATCCGGCCCCGGTTCGCGTCATGAGGAGCGTGGAGATGGTGAAGGAGAGCCGCTGGAGCATCCCCCCCAACGCGCCGGCCTGCATGGAGAAGCACCTGGACGCCCTGCACTACCGAGCGGATGGCGCCCTGCTGCTCGGGGCCTCCAGCCTGACAGGGAGGTGCTGGCTGGGGTCCATCTGGGTGTTCAAGGACCCCAAACAGGCTCCGAACGAGGGCTTCTGCAGCGCCGGGGTCCAGACGGAGGCGGGGGTCGCCGACGTCAAGTGGGTGTCGGAGAAGGGGATCCTGGTGGCCTCTGACTCAGGCGCGGTGGAGATGTGGGAGCTGGCGGAGGACGAGACCCTGATCGTGAGCAAGTTCTGCCGCCACGAGCACGACGACATCGTCACCAGCATCAGCCCGATGGCACGTGAGGGACACGCGGTCAGCGGCAGCATGGACTGCTGGATCAAGGTGTGGGACCTGGCCCAGGAGTCGGTGCTCAACATGTACAATGCTCACTCCAGTCCCATCAGCTGCGTGTCCTGCAGCCCCACCGAAGAGGCCCTGTTTCTGTCCAGCGGTCAGGACGGGAGGCTCCTGCTGTGGGACCGAAGGAAGCCCAAGCCCGCGTCCCGCCTCGACATCGGCAGCTCCCCTTCCTGCCCTACCTCAATAGCCTGGCACCCTCAGAAGAGCTCTGTCTTCGCCTACGgAGACGACACGGGCCGCGTGGTGGTCCGGGAGCTGCAGGGCGGGGACAGCACGAGGACGGCGGATGCCCACACGCGAAGGGTCACCGGCCTGGCCTTCTCCTCGCACAGCACACCCCTCCTGGCCTCGATCAGTGATGACTGCTCCGTGGCTGTGATGGACGCTGACCTCAAAGAGATTTTCAGGGACCGGCGTCACCAGGACTTCGTGCGCGGCATCTCCTGGGCCCCCGACGGCTCTTCCACCCTCACGACGGCTGGCTGGGACCACCAGATCCTGCACCACACCATGCAGACGGCCGAGAAGTCCCCTCCGGCGGCCGCCGCCGCCTCCCCCACCTCACCCTAGAAGTCACAGCCCCCTCCCCTCGGTCCCACCTCGGACTCTCTCCTGGAGCGGAGGAGGGTGCCGGGCACATCTGACGTCTGACGAGTCTGGTACTGTGGtccccctctgtggaggaggtgTCTGTGCCGCggcctgttgtgtgtgtgtgtccccgTTTTGTCGTCCTGTGGGGGGTGGTCTGTGCTCGGTGTGCCGCGAGGAGAGGCTGGCAAAGATTGTACTAATTAAGCCAGCCAATCAGTGTCCagctgcaataaaaacaataaaagcaaggCCAAGGGTATGTTTTTACAGCTagcacccccaccaccctcctCTGTTCCTCAATTTCAGACTCCCCACccacacatacatgtatgttCTTGTTAAATGTGCCGGTCAGTTGAATAACAAGGCACTGTGATAAAAAGTTCCTCATCCATGAGGGTCGTTCGAAGGTCACTCACCCCTCAGTCTGTGTGTTGATCTCGTCGCTGGGCCACGAGCGCAGACTGCAGGGTTATGAGTTTCTGAAATTGCAGGTCTTCAATAAAGTTTGTATCCTCAATACCTGGTAACTGGGGCGTGGTGTCTCTGTTCCTTGTGGCTGCCTGTGCGTGCGGTTGCAAGCCGAGGAGTGGTCCGACCGGGCGGGCAGGATTGTGTGGTTTCCGTGTGTGCGGGCTCGGTCTGGGCCGCTCGGTCTGCTCAGAGCGCTGTCGCTGCAGAGGACAGGAATGACGATCTGTGGTTCGAGCTCCTGTTTTTGTTGACCAGACGGGCGGTGTTGCCACTCTGCTCATGCAAACACCatgaaaaaaactttaaaaccaGGTGTCTAGGTGGCCACTGTGCGTTTACTTCTCCAATATTTGTCTTGGTTTTCCGAAATGTCCTCTGAGCGTgcatcagtttcttttttttcctgttatcaTTAGTTTTCGGAGATGTTTCCCTGGAGATGTTCTGGACAGCCAGTCACACCGGTTCTCTTGTTCATAAACCACAACAGCTCGGTTTGCCTTGCCCAGGACACAGTTTTATTACCAAGATAATTGCCAGAATGGTTGGGTTTGACCTGGAGGACAAACTCCTCCGTATTCTGAAATGAACTGCTTTTAGAACGACCATCAATCACGA

Function

GO: NA

KEGG:

id description
K13221 WDR77, MEP50; methylosome protein 50

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013864 True 2406 mRNA 0.60 10 45695635 45702773

Neighbor

gene id symbol gene type direction distance location
AMCG00013860 NA coding downstream 13545 45675256 ~ 45682090 (-)
AMCG00013858 NA coding downstream 27354 45664880 ~ 45668281 (-)
AMCG00013857 LOC107698281 coding downstream 48500 45639830 ~ 45647135 (-)
AMCG00013861 NA coding downstream 56844 45636928 ~ 45638791 (-)
AMCG00013859 NA coding downstream 73770 45616135 ~ 45621865 (-)
AMCG00013867 NA coding upstream 9318 45712091 ~ 45712579 (-)
AMCG00013866 NA coding upstream 41006 45743779 ~ 45752588 (-)
AMCG00013865 NA coding upstream 81093 45783866 ~ 45784824 (-)
AMCG00013875 NA coding upstream 102658 45805431 ~ 45806333 (-)
AMCG00013874 rbbp5,LOC106583489 coding upstream 104232 45807005 ~ 45816694 (-)
G47259 NA non-coding downstream 72880 45622515 ~ 45622755 (-)
G47185 NA non-coding downstream 427239 45268054 ~ 45268396 (-)
G47180 NA non-coding downstream 590748 45104223 ~ 45104887 (-)
G47168 NA non-coding downstream 728707 44966010 ~ 44966928 (-)
G47162 NA non-coding downstream 732155 44961849 ~ 44963480 (-)
G47358 NA non-coding upstream 122950 45825723 ~ 45826654 (-)
G47359 NA non-coding upstream 125192 45827965 ~ 45828251 (-)
G47365 NA non-coding upstream 143076 45845849 ~ 45854800 (-)
G47391 NA non-coding upstream 218333 45921106 ~ 45922914 (-)
G47538 NA non-coding upstream 528552 46231325 ~ 46238514 (-)
G47261 NA other downstream 71740 45623238 ~ 45623895 (-)
AMCG00013846 NA other downstream 351620 45338859 ~ 45344015 (-)
AMCG00013820 tmem167b other downstream 2081056 43609282 ~ 43614579 (-)
G46742 NA other downstream 2994567 42699506 ~ 42701068 (-)
AMCG00013773 NA other downstream 3239877 42428777 ~ 42455758 (-)
AMCG00013882 cry4,LOC108413014 other upstream 216863 45919636 ~ 45928309 (-)
AMCG00013883 NA other upstream 259417 45962190 ~ 45974311 (-)
AMCG00013890 cacna1s other upstream 372656 46075429 ~ 46083542 (-)
G47501 NA other upstream 457766 46160539 ~ 46163487 (-)
AMCG00013903 NA other upstream 596388 46299161 ~ 46311118 (-)

Expression


Co-expression Network