AMCG00013869


Basic Information

Item Value
gene id AMCG00013869
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45800918 ~ 45802811 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013869
ATGGAGGAGCCCAGCAGCTTCCTGAGCCAGACCGAAGACGAGGACACCGTGCTGGAGAAGCCCCTGGGGTACCTCACGCCCCTGCACGAGCTGGACAGTGGGCTGGGCTGCACCGACGGCAGCTTCCACCAGGGCGAGGTGTCCGGGATGGAGACGGAGGAGGGGGCGGAGGAACCTGGCTCCTCCCCGCTGGAGCTCACCAGCCGGGGGTCCCCCTCATCCGAGTCGCTCATCTCGTCAGAGCTCAGCGACTCCGGCTTCTACAGCGTCAGCACCGGGGAGTTCCGCCGCTTCCAGAGGCTTCTGGAGAAGAAGATCCGCCTCTACCGGGCCAAGATGGCCCCCCGGAGCCGGGGTGATGGTGGCGACAGGGAGCAGCTGGCTCTGAGGGATATCCTCAAGGCTCGCCGTGACCTCGAGTCCATCCCCGAGACCTTGACCTGTCAGCCTGTGAGCGGCTGGCCCGAGGAAGCCAGCCCCAGCAGCGTGGCTCGCAGGTGCATAATGGGCGTGTCGTCCGTGCAGTACAAGAAAGCCGAGAATCCCTGTCTGAGCAGGTACGGCTCCGGCACCAGCTCCCTGCTGTCCCCTAAAAGACCAGCTCTGACTAGCTCCCTGCTGTCCCCCTGCCGCTCCCCCTCCTGCCAGCAAAGGCACAAACAAGACTCTCTAGGCGACCTGCCGAGGAGGAGCTCCCAGCAGCTGTGCACCCGGAGCCCAGAGACCAGGAGAGCGAGACATTGCTCCATGCTGGAATACAGGACTCTCCCGGCTCTCCACCAGCATAGGAGACTGGGAGGGGACGATCCAATCACAAGGGGCGGGCTGGACTGTCCGAGTGGCTCCTGGCAGAGGGGCACAGCTGAACAGAATAGGGGCATCTTACCTGGGGACTGTTGTTCAGCCAGCGAGGGCAACAGAATGGGTGGAACCGAAAGTGGGGAGAAACCGGACAAGGTTGCCAGCAAGGGGGCTCCTGCCCGTGGTGAAAGGCGCTGCCAGACGTCCGAAATTCCAGGGTCCTGGCCAAAAACTGGCAAGAGCTCCGTTCTGGAAACAGGCCTCCAAGAGAGCGACCCTCCAACCCCGAGGAAGGGCGTGCCCAACCCCCGGGTCCTGAGGAACCAGTTGCTGAAGGCACGGGCGTCTCGGCTGGCGGACGAGCGCAGCGGGGTCACCACGGACGAGGAGACGCGCAGCGAGGCAAAGACAGGCCGCTACTGGAGCAAGACGGAGCGCAGGAGGCATGTGCTGACTGCCCGGGAGCAGCGGCAGCGGCGCATGACCAGGGTCCCGACTTGGGAGGGCGGCCGCAGAAAGGAGGCCTCCAGCACCGTCCTGGAGCTGAGCCACAGGAAGCTGTCACGCCTGCGCAACAGGAAGGTGCTGGACAGCTGGACCACCATCGAGGAGCTGTTGACGCACGGCACCAAGACTGCCTCCGGGAGCTGCGAGATCCTGTGCCCTAGTCCGCTGCTCTCAGTCACCACCGTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013869 True 1497 mRNA 0.65 2 45800918 45802811

Neighbor

gene id symbol gene type direction distance location
AMCG00013873 NA coding upstream 1977 45793535 ~ 45798941 (+)
AMCG00013863 NA coding upstream 60376 45720220 ~ 45740542 (+)
AMCG00013862 NA coding upstream 105890 45682080 ~ 45695028 (+)
AMCG00013852 guca1b,LOC107562461,LOC107657012 coding upstream 144546 45653353 ~ 45656372 (+)
AMCG00013855 NA coding upstream 164349 45635112 ~ 45636569 (+)
AMCG00013871 LOC103358259 coding downstream 31010 45833821 ~ 45846136 (+)
AMCG00013870 NA coding downstream 52641 45855452 ~ 45876895 (+)
AMCG00013868 NA coding downstream 75287 45878098 ~ 45885313 (+)
AMCG00013878 NA coding downstream 86484 45889295 ~ 45893895 (+)
AMCG00013881 NA coding downstream 92336 45895147 ~ 45901581 (+)
G47320 NA non-coding upstream 495 45782026 ~ 45800423 (+)
G47264 irf6 non-coding upstream 159281 45639864 ~ 45641637 (+)
G47262 NA non-coding upstream 176347 45624372 ~ 45624571 (+)
G47258 NA non-coding upstream 178112 45622587 ~ 45622806 (+)
G47255 atp5f1,LOC107679218,LOC107731279,LOC107711984 non-coding upstream 180686 45616133 ~ 45620232 (+)
G47336 NA non-coding downstream 23501 45826312 ~ 45826652 (+)
G47322 NA non-coding downstream 48284 45851095 ~ 45854769 (+)
G47383 NA non-coding downstream 99056 45901867 ~ 45903185 (+)
G47387 NA non-coding downstream 103291 45906102 ~ 45906399 (+)
G47390 NA non-coding downstream 118329 45921140 ~ 45921898 (+)
G47206 NA other upstream 440036 45326658 ~ 45360882 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other upstream 705249 45034772 ~ 45095669 (+)
G46945 NA other upstream 2360220 43438492 ~ 43440698 (+)
G46862 NA other upstream 2711275 43087289 ~ 43089643 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other upstream 2756482 43039984 ~ 43044436 (+)
AMCG00013872 NA other downstream 13561 45816372 ~ 45823228 (+)
G47398 NA other downstream 131848 45934659 ~ 45941906 (+)
AMCG00013879 dennd2d other downstream 140760 45943571 ~ 45959194 (+)
AMCG00013919 LOC102792503,LOC106583503,LOC106565096 other downstream 1234284 47037095 ~ 47073708 (+)
AMCG00013927 LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 other downstream 1417108 47219919 ~ 47227969 (+)

Expression


Co-expression Network