AMCG00013877


Basic Information

Item Value
gene id AMCG00013877
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45823117 ~ 45831441 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013877
ATGGTGTCTATGTCATCCTCAGTAGGGCGCCCGCAGACCGCGCCCTCTGATTGGTCCGCCGGGGCCCACGTGGTGCTGCCGGAGTCACGTTTATGCGGCGTGGCGCGACACGGCCGCTCGGGGCGCGCGGACCCGGCCTCAGGTCCGGTGAGGCACCGCGATGTCCGGACCACCGGTTTGGGGGATGTTTTTGCGCCCTACATGGATCTTGCAGTAAAAGTTTTGCAGTATTCCGACACCGAGACCGTGAGGCTGCAGCTCTGGGACATCTCCGGTTATGAGCGTTCCACCCCTATGACCCGGCTGTACTACAGAGAAGCTGCCAGCTGCATCATCAAGTTCGATGTCACAAACCCCTCCACCTTTCACAACTGCCTGATCTGGAAATGGGATATGGACAACGGGGCCATGCTCTTGGATGGCAGGCCTGTGCCCTGCATCTTGCTGGCCAACAAAACAATTCAAGAGCAGAGCCTCTGCCGCGAGTTATTGTTAGACTGGCCGAGCTCTGCTCTGCTCCTCTGGGTGCTCTGA

Function

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013877 True 534 mRNA 0.60 5 45823117 45831441

Neighbor

gene id symbol gene type direction distance location
AMCG00013874 rbbp5,LOC106583489 coding downstream 6423 45807005 ~ 45816694 (-)
AMCG00013875 NA coding downstream 16784 45805431 ~ 45806333 (-)
AMCG00013865 NA coding downstream 38293 45783866 ~ 45784824 (-)
AMCG00013866 NA coding downstream 70529 45743779 ~ 45752588 (-)
AMCG00013867 NA coding downstream 110538 45712091 ~ 45712579 (-)
AMCG00013876 LOC105900578,LOC105920322 coding upstream 26025 45857466 ~ 45859867 (-)
AMCG00013887 cept1,LOC105013905 coding upstream 147665 45979106 ~ 45991807 (-)
AMCG00013886 kctd20,LOC106572174 coding upstream 177663 46009104 ~ 46023024 (-)
AMCG00013889 mtch1,LOC106572175,LOC106566941 coding upstream 196974 46028415 ~ 46038881 (-)
AMCG00013888 NA coding upstream 219152 46050593 ~ 46074428 (-)
G47259 NA non-coding downstream 200362 45622515 ~ 45622755 (-)
G47185 NA non-coding downstream 554721 45268054 ~ 45268396 (-)
G47180 NA non-coding downstream 718230 45104223 ~ 45104887 (-)
G47168 NA non-coding downstream 856189 44966010 ~ 44966928 (-)
G47162 NA non-coding downstream 859637 44961849 ~ 44963480 (-)
G47365 NA non-coding upstream 14408 45845849 ~ 45854800 (-)
G47391 NA non-coding upstream 89665 45921106 ~ 45922914 (-)
G47538 NA non-coding upstream 399884 46231325 ~ 46238514 (-)
G47661 NA non-coding upstream 972170 46803611 ~ 46838764 (-)
G47718 NA non-coding upstream 1226098 47057539 ~ 47120601 (-)
G47261 NA other downstream 199222 45623238 ~ 45623895 (-)
AMCG00013846 NA other downstream 479102 45338859 ~ 45344015 (-)
AMCG00013820 tmem167b other downstream 2208538 43609282 ~ 43614579 (-)
G46742 NA other downstream 3122049 42699506 ~ 42701068 (-)
AMCG00013773 NA other downstream 3367359 42428777 ~ 42455758 (-)
AMCG00013882 cry4,LOC108413014 other upstream 88195 45919636 ~ 45928309 (-)
AMCG00013883 NA other upstream 130749 45962190 ~ 45974311 (-)
AMCG00013890 cacna1s other upstream 243988 46075429 ~ 46083542 (-)
G47501 NA other upstream 329098 46160539 ~ 46163487 (-)
AMCG00013903 NA other upstream 467720 46299161 ~ 46311118 (-)

Expression


Co-expression Network