AMCG00013881


Basic Information

Item Value
gene id AMCG00013881
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45895147 ~ 45901581 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013881
GCTTTTGGGTTTGGTGTGCAGGAATGAATGCAATGCTCACCGGACGACAGGCCAACAGACCTGCAGCCTGGCTGTCCCACACTATGAGACTCTGCACAGCGAAGGTTTGCTGGCCGCGGGGCCTGTGGACACTCTGCCTCCTGTGCCTCCTGGCGCTGCCGCACAGTGGCGGGGCGATGAAGGCGCGCTGTGGACGGGAGCTGGTGGCCGACCTGGAGTTCGTGTGTGGGGATCGCGGTTTCTACCACGGCCCGGCACAAGGGTCTCGGTACGGCAACAGACTGCGGGGCAAAGGCATCGTGGAGCTCTGCTGCCTGCGGGGGTGCGACCTCCAGCACCTGGAGGCCTACTGCGCCAAACCCAGACGCAGCCGGAGAGCCCCCTCTGACCCTGCCACCACTACCGCCGCCCCTGCCGCCAGCCCACACACCCCGGAGGCGAGTTCTGGCCCTGTACTGGACCGCCGAGCCATGCATGGCCAGGGCCGACCCGAGTCCGAGAGGCGAAGGGATTCGACCGCACAGTACCTTCGGCCCGTCACGGCATCCAGCCGCCAGAGTCACCGGCACACCGGGCTCACGGAGGTCTTCGCAACGCTGTcccaggaagagagagagagagtccccTGGGAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013881 True 635 mRNA 0.67 4 45895147 45901581

Neighbor

gene id symbol gene type direction distance location
AMCG00013878 NA coding upstream 1252 45889295 ~ 45893895 (+)
AMCG00013868 NA coding upstream 9834 45878098 ~ 45885313 (+)
AMCG00013870 NA coding upstream 18252 45855452 ~ 45876895 (+)
AMCG00013871 LOC103358259 coding upstream 49011 45833821 ~ 45846136 (+)
AMCG00013869 NA coding upstream 92336 45800918 ~ 45802811 (+)
AMCG00013880 NA coding downstream 74647 45976228 ~ 45978644 (+)
AMCG00013884 NA coding downstream 91632 45993213 ~ 46005467 (+)
AMCG00013885 NA coding downstream 135812 46037393 ~ 46047122 (+)
AMCG00013895 def6,LOC107757990,LOC107550223,LOC107700524 coding downstream 202407 46103988 ~ 46123681 (+)
AMCG00013894 ppard,LOC100136526,LOC107549971 coding downstream 232045 46133626 ~ 46144604 (+)
G47322 NA non-coding upstream 40378 45851095 ~ 45854769 (+)
G47336 NA non-coding upstream 68495 45826312 ~ 45826652 (+)
G47320 NA non-coding upstream 94724 45782026 ~ 45800423 (+)
G47264 irf6 non-coding upstream 253510 45639864 ~ 45641637 (+)
G47262 NA non-coding upstream 270576 45624372 ~ 45624571 (+)
G47383 NA non-coding downstream 286 45901867 ~ 45903185 (+)
G47387 NA non-coding downstream 4521 45906102 ~ 45906399 (+)
G47390 NA non-coding downstream 19559 45921140 ~ 45921898 (+)
G47546 NA non-coding downstream 395052 46296633 ~ 46302869 (+)
G47580 NA non-coding downstream 517551 46419132 ~ 46470471 (+)
AMCG00013872 NA other upstream 71919 45816372 ~ 45823228 (+)
G47206 NA other upstream 534265 45326658 ~ 45360882 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other upstream 799478 45034772 ~ 45095669 (+)
G46945 NA other upstream 2454449 43438492 ~ 43440698 (+)
G46862 NA other upstream 2805504 43087289 ~ 43089643 (+)
G47398 NA other downstream 33078 45934659 ~ 45941906 (+)
AMCG00013879 dennd2d other downstream 41990 45943571 ~ 45959194 (+)
AMCG00013919 LOC102792503,LOC106583503,LOC106565096 other downstream 1135514 47037095 ~ 47073708 (+)
AMCG00013927 LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 other downstream 1318338 47219919 ~ 47227969 (+)
AMCG00013943 NA other downstream 1850633 47752214 ~ 47819723 (+)

Expression


Co-expression Network