AMCG00013901


Basic Information

Item Value
gene id AMCG00013901
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 46215736 ~ 46217211 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013901
ATGGCTGCCACTGTGAACGTGTCCTGTCTGCTGAGCGCTGCCCTGATGGCCGTGTCCGTCCTGCTGTCCCTGTCTGTCCCGCCTGCTGCTGGACACCATGTGCGTCTCGGGAGCTGCTCTGTCACCGTCCACACCAAGGAGCTGCGAGAATACTTCCACGAGATTCGGCACGCCATTgtcaaggaggatgacaACATGGGCATCCGGCTGCTGAAAGAAAACACCATGAAGaatgtgcagGCGTCCGAGAGCTGCTGCTTCCTGCGCCAGCTGCTGCGCTTCTATGTGGAGAGCGTGTTCAGCCAATACAGCACCAGCAGCCCCCAGGTGCGCCGCCGGACCAGCAACCTGGCCAACTCCTTCCTCAGCATCAAGAGAGACCTGCGCCAGTGTGTGAGTGCCTGTCGTGGACGCCGCCTGGGGCCACAGATCACTGTGTCCTCAGTAGGGCCAGTAGCCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013901 True 462 mRNA 0.61 3 46215736 46217211

Neighbor

gene id symbol gene type direction distance location
AMCG00013900 NA coding upstream 7953 46199714 ~ 46207783 (+)
AMCG00013899 NA coding upstream 17839 46179141 ~ 46197897 (+)
AMCG00013893 NA coding upstream 38855 46165651 ~ 46176881 (+)
AMCG00013897 rpl10a,LOC105016832,LOC103141192 coding upstream 52237 46160628 ~ 46163499 (+)
AMCG00013896 NA coding upstream 55320 46156424 ~ 46160416 (+)
AMCG00013902 NA coding downstream 42767 46259978 ~ 46270819 (+)
AMCG00013904 NA coding downstream 176598 46393809 ~ 46404685 (+)
AMCG00013909 fam72a,zgc:101564,LOC107656018,LOC108425783,LOC107548849,LOC107675824,LOC107590148,LOC105017400 coding downstream 335820 46553031 ~ 46557951 (+)
AMCG00013913 NA coding downstream 526770 46743981 ~ 46752657 (+)
AMCG00013911 foxp4,LOC107675840,LOC107739274,LOC107548756 coding downstream 578831 46796042 ~ 46837010 (+)
G47390 NA non-coding upstream 293838 45921140 ~ 45921898 (+)
G47387 NA non-coding upstream 309337 45906102 ~ 45906399 (+)
G47383 NA non-coding upstream 312551 45901867 ~ 45903185 (+)
G47322 NA non-coding upstream 360967 45851095 ~ 45854769 (+)
G47336 NA non-coding upstream 389084 45826312 ~ 45826652 (+)
G47546 NA non-coding downstream 79422 46296633 ~ 46302869 (+)
G47580 NA non-coding downstream 201921 46419132 ~ 46470471 (+)
G47669 NA non-coding downstream 713256 46930467 ~ 46934777 (+)
G47681 NA non-coding downstream 752527 46969738 ~ 46971538 (+)
G47684 NA non-coding downstream 758305 46975516 ~ 46976186 (+)
AMCG00013879 dennd2d other upstream 256542 45943571 ~ 45959194 (+)
G47398 NA other upstream 273830 45934659 ~ 45941906 (+)
AMCG00013872 NA other upstream 392508 45816372 ~ 45823228 (+)
G47206 NA other upstream 854854 45326658 ~ 45360882 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other upstream 1120067 45034772 ~ 45095669 (+)
AMCG00013919 LOC102792503,LOC106583503,LOC106565096 other downstream 819884 47037095 ~ 47073708 (+)
AMCG00013927 LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 other downstream 1002708 47219919 ~ 47227969 (+)
AMCG00013943 NA other downstream 1535003 47752214 ~ 47819723 (+)
AMCG00013961 NA other downstream 2022489 48239700 ~ 48258433 (+)
G48018 NA other downstream 2051543 48268754 ~ 48269272 (+)

Expression


Co-expression Network