AMCG00013907


Basic Information

Item Value
gene id AMCG00013907
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 46404824 ~ 46406931 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013907
ATGTACCCCGACTGCCTTACATGGGAGGAGAGCCACGACCGTAAACAAGACCGTTATGCCTGCGTGTCGCATAATGCTGCAaaggaagaagaggagaaacCAAAGGAGCTCTCGAAGGACGAGATCAGGGCGAAGATCGATGACTACAACGCCAAGGTCTCTGAATGTGTGGGAATGAAGCTGAGCGAGGACGGCACCTACACCGGCTTCATCAAGGTGCACCTGAAGCTGCGGCGGCCGGTGACGGTTACGGGGGACGGCTCGGACCGCAAGACGTCCTTCTACCTGCCGCTGGACGCCGTGAAGCAGCTGCACATCAGCAGCACCACCATGGTCAGCGAGGTCATCCAGGGGCTGCTGCGCAAGTTCATGGTGCTCGACAATCCCCGCAAATTCGCACTTTACCGACGGACGCACCGCGACAGCCAGGacctGTTCCAGAAGCTGCCCGTGTCGGACCATCCCTTACTCCTGCGCCTGCTGACCGGGCCGGACCCCGAGAAACTTACCTTTGTGCTGAAGGAGAACGAGACGGGGGACGTGGAGTGGCACGCCTTCTCGGTGCCCGAGCTGCAGAACTTCCTGACCATCCTCGAGAAGGAGGAGCGCGACCGGATCAAGCAGGTCCAGCAGAAGTACGAGGCATACCGCGAAAGGCTGAAGCGGGCCTTGCATGAGTCACAGGGCAAGCCGGGGTAG

Function

GO: NA

KEGG:

id description
K08015 RASSF5, RAPL; Ras association domain-containing protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013907 True 699 mRNA 0.60 5 46404824 46406931

Neighbor

gene id symbol gene type direction distance location
AMCG00013908 NA coding downstream 15206 46388154 ~ 46389618 (-)
AMCG00013905 dyrk3,zgc:172180,LOC107728622 coding downstream 18583 46384682 ~ 46386241 (-)
AMCG00013898 tmem9,LOC107679355,LOC107711977,LOC106572715 coding downstream 302208 46094540 ~ 46102616 (-)
AMCG00013891 NA coding downstream 317046 46087083 ~ 46087778 (-)
AMCG00013888 NA coding downstream 330396 46050593 ~ 46074428 (-)
AMCG00013906 NA coding upstream 45133 46452064 ~ 46465408 (-)
AMCG00013910 srgap2 coding upstream 63440 46470371 ~ 46507717 (-)
AMCG00013914 NA coding upstream 523644 46930575 ~ 46946388 (-)
AMCG00013916 NA coding upstream 563328 46970259 ~ 46976190 (-)
AMCG00013915 NA coding upstream 569760 46976691 ~ 46985670 (-)
G47538 NA non-coding downstream 166310 46231325 ~ 46238514 (-)
G47391 NA non-coding downstream 481910 45921106 ~ 45922914 (-)
G47365 NA non-coding downstream 550024 45845849 ~ 45854800 (-)
G47359 NA non-coding downstream 576573 45827965 ~ 45828251 (-)
G47358 NA non-coding downstream 578170 45825723 ~ 45826654 (-)
G47661 NA non-coding upstream 396680 46803611 ~ 46838764 (-)
G47718 NA non-coding upstream 650608 47057539 ~ 47120601 (-)
G47717 NA non-coding upstream 664412 47071343 ~ 47075028 (-)
G47766 NA non-coding upstream 818870 47225801 ~ 47227254 (-)
G47807 NA non-coding upstream 1088480 47495411 ~ 47495684 (-)
AMCG00013903 NA other downstream 93706 46299161 ~ 46311118 (-)
G47501 NA other downstream 241337 46160539 ~ 46163487 (-)
AMCG00013890 cacna1s other downstream 321282 46075429 ~ 46083542 (-)
AMCG00013883 NA other downstream 430513 45962190 ~ 45974311 (-)
AMCG00013882 cry4,LOC108413014 other downstream 476515 45919636 ~ 45928309 (-)
G47666 NA other upstream 464938 46871869 ~ 46875370 (-)
AMCG00013932 ruxe,snrpe other upstream 781664 47188595 ~ 47200897 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other upstream 1457919 47864850 ~ 47868863 (-)
G47896 NA other upstream 1560494 47967425 ~ 47974915 (-)
AMCG00013964 NA other upstream 1959112 48366043 ~ 48375096 (-)

Expression


Co-expression Network