AMCG00013918


Basic Information

Item Value
gene id AMCG00013918
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 47010292 ~ 47012262 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013918
ATGAAACTGGCCGCAATCCTCACAGTGGCGGGGCTGTTTGAACTCGCCCTGTGTCAGAGCCAAGACAGGTTCTTCTGGCTGTCCTACCTGCGCAGCCGCTGGTTCAATGGCCATTCCGGTCTCGACTCCAGACGCTTGGCTGGCCGCGACTGCCCCCTGGAGTGCGACTGCCCCCCCAGCTTTCCCATCGCCATGTACTGTGACAGCCGCAACCTCAAGCACATCCCCTTTGTCCCATCGCGGATGAAGTACGTCTACTTCCAGAACAATCGGATCAGCTCCATTCAGGACGGCGTCTTTGACAACGCCACCGAGCTCGTCTGGATCATGCTGCACCGGAACACGCTGAGCACAGACAAGATCGGGAAGAAGGTCTTCTCCACGCTGACGAACCTGGACAGATTATACATGGACCACAACAACCTAACACGGGTGCCCGCTGGATTGCCCAATTCACTGAGGGACCTTCGCTTGGACAACAACAAGATCTCCAAGATCCAGCCCAACTCCTTCGAGGGGATGCTCAACCTATCAGTACTGCTGCTTCACGACAACGCCATCCAGGAGGTCGGAGGGGCTCTGAAAGGGCTGAAGTCCTTGTCGCTCCTGGATATCAGCAACAACCAGCTGACAAAACTCCCGGACAACCTGCCCGAGCACTTGCACCAGCTCTACCTGGAGTTCAACAACATCACCACCATCCCTGGAGACTACTTCCACAGGTTCCCCAAGCTGCAGTACGTCCGGCTCTCCAACAACCAGCTCACGGATGAGGGGATCCCCCGCAACGCGTTCAACATGAGCAGCCTGATCGAGCTGGACCTGTCATACAACAAGCTGCAGAAGATTCCCCCGGTCAGCACCAGCCTGGAGAACCTCTACCTTCATGCCAATCAGATCAAAGAGTTCTCCATCGACAGCTTCTGCACGACGATTGACATCATGAATTTCTCACAGCTGCGAGTTCTTCGGCTGGACGGCAACCAGATCCCCCAGAACGCCATCCCCCCCGAAGTGGCCCTGTGTCTCCGCCTGGCAACCATCATTGCTGTGTAG

Function

GO: NA

KEGG:

id description
K08121 FMOD; fibromodulin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013918 True 1056 mRNA 0.57 2 47010292 47012262

Neighbor

gene id symbol gene type direction distance location
AMCG00013912 LOC106565692 coding upstream 139579 46858640 ~ 46870713 (+)
AMCG00013911 foxp4,LOC107675840,LOC107739274,LOC107548756 coding upstream 173282 46796042 ~ 46837010 (+)
AMCG00013913 NA coding upstream 257635 46743981 ~ 46752657 (+)
AMCG00013909 fam72a,zgc:101564,LOC107656018,LOC108425783,LOC107548849,LOC107675824,LOC107590148,LOC105017400 coding upstream 452341 46553031 ~ 46557951 (+)
AMCG00013904 NA coding upstream 605607 46393809 ~ 46404685 (+)
AMCG00013923 NA coding downstream 14223 47026485 ~ 47026974 (+)
AMCG00013917 NA coding downstream 65598 47077860 ~ 47085038 (+)
AMCG00013924 etnk2,LOC106565623,LOC107694884 coding downstream 111446 47123708 ~ 47132176 (+)
AMCG00013939 lrrn2,LOC108425772 coding downstream 528971 47541233 ~ 47543434 (+)
AMCG00013941 LOC106566646,LOC106571888 coding downstream 712172 47724434 ~ 47730274 (+)
G47684 NA non-coding upstream 34106 46975516 ~ 46976186 (+)
G47681 NA non-coding upstream 38754 46969738 ~ 46971538 (+)
G47669 NA non-coding upstream 75515 46930467 ~ 46934777 (+)
G47580 NA non-coding upstream 539821 46419132 ~ 46470471 (+)
G47546 NA non-coding upstream 707423 46296633 ~ 46302869 (+)
G47728 NA non-coding downstream 135093 47147355 ~ 47156704 (+)
G47762 NA non-coding downstream 219792 47232054 ~ 47248989 (+)
G47767 NA non-coding downstream 244235 47256497 ~ 47258758 (+)
G47791 NA non-coding downstream 394354 47406616 ~ 47407552 (+)
G47797 NA non-coding downstream 408754 47421016 ~ 47421229 (+)
AMCG00013879 dennd2d other upstream 1051098 45943571 ~ 45959194 (+)
G47398 NA other upstream 1068386 45934659 ~ 45941906 (+)
AMCG00013872 NA other upstream 1187064 45816372 ~ 45823228 (+)
G47206 NA other upstream 1649410 45326658 ~ 45360882 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other upstream 1914623 45034772 ~ 45095669 (+)
AMCG00013919 LOC102792503,LOC106583503,LOC106565096 other downstream 24833 47037095 ~ 47073708 (+)
AMCG00013927 LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 other downstream 207657 47219919 ~ 47227969 (+)
AMCG00013943 NA other downstream 739952 47752214 ~ 47819723 (+)
AMCG00013961 NA other downstream 1227438 48239700 ~ 48258433 (+)
G48018 NA other downstream 1256492 48268754 ~ 48269272 (+)

Expression


Co-expression Network