AMCG00013926


Basic Information

Item Value
gene id AMCG00013926
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 47101579 ~ 47112942 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013926
ATGTCTCCGTCGTCGCCCCGGCCGGCCCGCAAGAGCGAGTGGGTCAGAAGCGCCTTAGCCCACCACTACCACCCGGACCCGGGCGCGGAGAACGAGATCGTGGTCCTGGCCACAGGGGTGGACCAGTACCTGCAGGAGATCTTCCACCACTTGGCTTATCCCGACGGGGACGCCCTGGTCTCCGGGGAGGACTTCAGGCTGCTGTGCGCGGTGCTGGGGGTCCCCACGGAGGGCGAGGCGGAGGGGCTGGAGGCGGGGGACGGGGGCGAGGCGCCGGGGGTCTGCGCTGCGCTGCCCCGGGAGCTCGGCTTCAAGGACTTCCACTCCCGCCTCTGCGGATACTTCCGCCTGCGCGCCCGGGGCTGTGGGTCCGGATCCCGGCTCCTGGTGTCCGAGGAGACGGAGCACATCGAGAGGGAGATCCGGCTCCGCTGGCCGAGGGTGCGCCGGAGAAAGTGCGTCAGTTTCGACCTGTCCAGGGACGCCGCCGCCGGGGGGACCGGGAGGAGGTCCATCCGCACCTCGGGGTCCATACTGAAACTGGACAAGCTGCACCGCTGCTGCGGGGAGTCGGGGGAGAAGACAGACGGCGTGGATCCGCAGGTGGCGGCGCTGACCCAGCTGGAGGTGGAGAACGCCAGCCTGCGGGAGCTGGTGGAGGACCTGCGTGCCGCGCTGCAGGGGAGCGATGCCCGCTGCCTGGCCCTGGAGGTGGCGCTGCGCAGAGATGGGGGCAGGCAGAGCACGCCTGGGGAGACGCACAGGACACGGGAGGCGCTGGAGGCACAGGGGTCTCCCGGGTGGCGGGGGACCAGGGCTCTGCTAAAGGAGCTGGAGCTCATCCGGGCCTCGCGGGACgggcagctggaggaggccgTGCGCTTCAACCAGaggctggaggaggagctgagGGCGGCCAATCGGGAGGCCCAGCAGCTGGAGGAGGCGGCCGCTCGGCTGCAGCAGGAGAACAGGCAGATCAAGAGGAAGGCAGAGGATGCCCGTGCTGCACTGCTGTCGGGACTGGCGCGGGTGCGAGAGATCCAGGGCCGGGCCGGCCTGGTGCCCGCGCTGCAGGGCCGGGTGCGAGAGCTGGAGGACGAGCTGCAGGAGCACAGGGCCCGGTGCACCTGCCGGACGGATTCTCCCGACCAGGAAGGCGATGTCTCTGCGAACTTTGAATCCCGGAGCCCCTCACAACGCCGCTCGCCTACCGGGGGGGACGAATCCTGCTCCGGAGGAGGTGAGCGTGACCGGTGGCATCTGGTGGTGCGGGGGGGCGGGCCGGGGACGGAGGAGCAGCTGCAGCGCGCCGTGGAGGGCCGGGCCGCGTCagacgaggaagaggaggaaaggGGCGGCGGGGAGGGCCGATGCTGCCTCCTGGAGCTCAAGCGTCTGATTGGCCTCCTGCGCTGCTGCGCCAAAGGGGAGGCGCTGGAGCGTGTAGCTGGGCTGGGGGGGACACTGGAGAAATCACCTGTCTGCTCGCTCACCTGCCTCTCTCCCCCCCGCAGCTGCCAGAGCAGCGCTGCTCGCCAGCTGCTCCTCCACCAGGCCTGTTTCCATTGCAGCCCACTAGACAGCATCTCCCCCCCAGCATTGGAGCAGAGGGCGGGCAGGACGCGCCTGAGCCACGGCCGCGCTGAGGAGCGGGAGAGGagcgaggagagagagagcgaccTGGAGAGGGTGAGCGGCGGGAGAGGGGCTGGGTGGGTCACCCGGctgCTGTGCTCGGTAGGGAAGGACCTGCAGCTGAAGCAGGAGGAGGctgagatgctgagactggAGCTGCAGATGCTGGAGACAGAGCGCGTCCGGCTGTCCCTGCTGGAGGAGAAGCTGGCCGACACGCTGaccctgctgctgcagctccaCCACCAGaatGTCTCTCGTCGAGCCCTGGGCAAGATCCTGATGGACACTTTAGACGTCTGTGACAAGGCTGGCCACGgccCGGCCCACTCGCCTCAGGTTCTGGACACTCTCTGCCGGCAGATCCAGTCCTGTGAGCTGCTGTGCCCGGGCAGCGGCAGCCCGGCGGGCACTGGGCACCCCCGGGGGTCCACCAATCCTCTGCTCATCTCCTGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013926 True 2097 mRNA 0.70 8 47101579 47112942

Neighbor

gene id symbol gene type direction distance location
AMCG00013922 NA coding downstream 75198 47024851 ~ 47026381 (-)
AMCG00013921 NA coding downstream 83852 47015056 ~ 47017727 (-)
AMCG00013920 NA coding downstream 101365 46995142 ~ 47000214 (-)
AMCG00013915 NA coding downstream 115909 46976691 ~ 46985670 (-)
AMCG00013916 NA coding downstream 125389 46970259 ~ 46976190 (-)
AMCG00013925 NA coding upstream 38149 47151091 ~ 47162001 (-)
AMCG00013929 NA coding upstream 88313 47201255 ~ 47212425 (-)
AMCG00013928 NA coding upstream 100657 47213599 ~ 47217346 (-)
AMCG00013930 LOC108435245,LOC108232143,LOC106519305,LOC106567267,LOC105906848,LOC105906847 coding upstream 117617 47230559 ~ 47240804 (-)
AMCG00013931 NA coding upstream 131440 47244382 ~ 47274829 (-)
G47717 NA non-coding downstream 26551 47071343 ~ 47075028 (-)
G47661 NA non-coding downstream 262815 46803611 ~ 46838764 (-)
G47538 NA non-coding downstream 863065 46231325 ~ 46238514 (-)
G47391 NA non-coding downstream 1178665 45921106 ~ 45922914 (-)
G47365 NA non-coding downstream 1246779 45845849 ~ 45854800 (-)
G47766 NA non-coding upstream 112859 47225801 ~ 47227254 (-)
G47807 NA non-coding upstream 382469 47495411 ~ 47495684 (-)
G47809 lrrn2,LOC108425772 non-coding upstream 427621 47540563 ~ 47545591 (-)
G47839 NA non-coding upstream 576903 47689845 ~ 47694894 (-)
G47917 NA non-coding upstream 903619 48016561 ~ 48016838 (-)
G47666 NA other downstream 226209 46871869 ~ 46875370 (-)
AMCG00013903 NA other downstream 790461 46299161 ~ 46311118 (-)
G47501 NA other downstream 938092 46160539 ~ 46163487 (-)
AMCG00013890 cacna1s other downstream 1018037 46075429 ~ 46083542 (-)
AMCG00013883 NA other downstream 1127268 45962190 ~ 45974311 (-)
AMCG00013932 ruxe,snrpe other upstream 75653 47188595 ~ 47200897 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other upstream 751908 47864850 ~ 47868863 (-)
G47896 NA other upstream 854483 47967425 ~ 47974915 (-)
AMCG00013964 NA other upstream 1253101 48366043 ~ 48375096 (-)
AMCG00013967 NA other upstream 1342961 48455903 ~ 48479577 (-)

Expression


Co-expression Network