AMCG00013928


Basic Information

Item Value
gene id AMCG00013928
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 47213599 ~ 47217346 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013928
TTCACCATCATGGTCTCCACGCCGGCCAACCGACAGACATTCATCAAGTCCACCATCAGCTTCCTGCGGAAATACGGGTTTGACGGGCTGGACCTGGACTGGGAGTTCCCTGGTGGTCGAGGGAGCCCCCTGGGGGACAAGCAGAAATTCACCCTGTTGGTGAAGACCCTAGCACTTGACCTTACCTTTCCACTTCCTCTCAGCCGGAAGCCTAGCTCTGTTACTGCATCAAATTTGAGCCCACATGGTCTTCTCTTTCAGATCTGCAATTTTAGACAAGGCGCCACCATTAACTGGATTCAGGACCAGAAGGTGCCCTATGCCACCAAGGGAAACGAGTGGGTGGGCTTTGACAACAAGCAGAGCTACGAGACCAAGgtCCAGTGGCTGAAGGACAACAAGTTCGGCGGGGCCTTCGTGTGGGCTCTGGATCTGGACGACTTTGCGGGACAGTTCTGTGGAGAAGGGCCCTATCCCCTGATCAGGCACCTGCGCAGCCTGCTCAACCTCCAGCCAACACTCCCACCTGGAGCCACAACCACCACGCAGGTGCCCGGAACCACAAACACCACAAAGACCAGTACCAGtaccacaaccaccaccaccaccaccaccaaaccCAGCTCTGGCTTCTGTGCCGGCAAGCCTGACGGACTGTACCCGAACAAAGATGACCGTAATGCCTTCTACAGTTGCACTCATGGCAGGACCTACCTACAGAGGTGCAGTGCTGGGCTGGTGTTCAACGATCAGTGCAAGTGCTGCGACTGGCCTTAG

Function

GO:

id name namespace
GO:0071704 organic substance metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013928 True 777 mRNA 0.56 4 47213599 47217346

Neighbor

gene id symbol gene type direction distance location
AMCG00013929 NA coding downstream 1174 47201255 ~ 47212425 (-)
AMCG00013925 NA coding downstream 51598 47151091 ~ 47162001 (-)
AMCG00013926 NA coding downstream 100657 47101579 ~ 47112942 (-)
AMCG00013922 NA coding downstream 187218 47024851 ~ 47026381 (-)
AMCG00013921 NA coding downstream 195872 47015056 ~ 47017727 (-)
AMCG00013930 LOC108435245,LOC108232143,LOC106519305,LOC106567267,LOC105906848,LOC105906847 coding upstream 13213 47230559 ~ 47240804 (-)
AMCG00013931 NA coding upstream 27036 47244382 ~ 47274829 (-)
AMCG00013933 NA coding upstream 58325 47275671 ~ 47290041 (-)
AMCG00013934 nfasc coding upstream 106365 47323711 ~ 47368062 (-)
AMCG00013936 NA coding upstream 193022 47410368 ~ 47416382 (-)
G47718 NA non-coding downstream 92998 47057539 ~ 47120601 (-)
G47717 NA non-coding downstream 138571 47071343 ~ 47075028 (-)
G47661 NA non-coding downstream 374835 46803611 ~ 46838764 (-)
G47538 NA non-coding downstream 975085 46231325 ~ 46238514 (-)
G47391 NA non-coding downstream 1290685 45921106 ~ 45922914 (-)
G47766 NA non-coding upstream 8455 47225801 ~ 47227254 (-)
G47807 NA non-coding upstream 278065 47495411 ~ 47495684 (-)
G47809 lrrn2,LOC108425772 non-coding upstream 323217 47540563 ~ 47545591 (-)
G47839 NA non-coding upstream 472499 47689845 ~ 47694894 (-)
G47917 NA non-coding upstream 799215 48016561 ~ 48016838 (-)
AMCG00013932 ruxe,snrpe other downstream 12702 47188595 ~ 47200897 (-)
G47666 NA other downstream 338229 46871869 ~ 46875370 (-)
AMCG00013903 NA other downstream 902481 46299161 ~ 46311118 (-)
G47501 NA other downstream 1050112 46160539 ~ 46163487 (-)
AMCG00013890 cacna1s other downstream 1130057 46075429 ~ 46083542 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other upstream 647504 47864850 ~ 47868863 (-)
G47896 NA other upstream 750079 47967425 ~ 47974915 (-)
AMCG00013964 NA other upstream 1148697 48366043 ~ 48375096 (-)
AMCG00013967 NA other upstream 1238557 48455903 ~ 48479577 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other upstream 1600637 48817983 ~ 48821156 (-)

Expression


Co-expression Network