Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013941 |
| gene name | LOC106566646,LOC106571888 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 47724434 ~ 47730274 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: renin-like |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0004190 | aspartic-type endopeptidase activity | molecular_function |
| id | description |
|---|---|
| K01380 | REN; renin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013941 | True | 1209 | mRNA | 0.59 | 8 | 47724434 | 47730274 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013939 | lrrn2,LOC108425772 | coding | upstream | 181000 | 47541233 ~ 47543434 (+) |
| AMCG00013924 | etnk2,LOC106565623,LOC107694884 | coding | upstream | 592258 | 47123708 ~ 47132176 (+) |
| AMCG00013917 | NA | coding | upstream | 639396 | 47077860 ~ 47085038 (+) |
| AMCG00013923 | NA | coding | upstream | 697460 | 47026485 ~ 47026974 (+) |
| AMCG00013918 | NA | coding | upstream | 712172 | 47010292 ~ 47012262 (+) |
| AMCG00013953 | NA | coding | downstream | 355685 | 48085959 ~ 48097083 (+) |
| AMCG00013952 | LOC108250382 | coding | downstream | 369402 | 48099676 ~ 48143917 (+) |
| AMCG00013951 | NA | coding | downstream | 415124 | 48145398 ~ 48158245 (+) |
| AMCG00013960 | NA | coding | downstream | 497141 | 48227415 ~ 48234227 (+) |
| AMCG00013962 | NA | coding | downstream | 506489 | 48236763 ~ 48239245 (+) |
| G47810 | NA | non-coding | upstream | 140532 | 47552159 ~ 47583902 (+) |
| G47804 | NA | non-coding | upstream | 178843 | 47545192 ~ 47545591 (+) |
| G47797 | NA | non-coding | upstream | 303205 | 47421016 ~ 47421229 (+) |
| G47791 | NA | non-coding | upstream | 316882 | 47406616 ~ 47407552 (+) |
| G47767 | NA | non-coding | upstream | 465676 | 47256497 ~ 47258758 (+) |
| G47936 | NA | non-coding | downstream | 328459 | 48058733 ~ 48059592 (+) |
| G47937 | NA | non-coding | downstream | 329641 | 48059915 ~ 48060814 (+) |
| G47958 | NA | non-coding | downstream | 431937 | 48162211 ~ 48162427 (+) |
| G47959 | NA | non-coding | downstream | 433597 | 48163871 ~ 48164673 (+) |
| G47960 | LOC107654379,LOC107756628,LOC107573300,LOC107751188 | non-coding | downstream | 434521 | 48164795 ~ 48165036 (+) |
| AMCG00013927 | LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 | other | upstream | 496465 | 47219919 ~ 47227969 (+) |
| AMCG00013919 | LOC102792503,LOC106583503,LOC106565096 | other | upstream | 650726 | 47037095 ~ 47073708 (+) |
| AMCG00013879 | dennd2d | other | upstream | 1765240 | 45943571 ~ 45959194 (+) |
| G47398 | NA | other | upstream | 1782528 | 45934659 ~ 45941906 (+) |
| AMCG00013872 | NA | other | upstream | 1901206 | 45816372 ~ 45823228 (+) |
| AMCG00013943 | NA | other | downstream | 21940 | 47752214 ~ 47819723 (+) |
| AMCG00013961 | NA | other | downstream | 509426 | 48239700 ~ 48258433 (+) |
| G48018 | NA | other | downstream | 538480 | 48268754 ~ 48269272 (+) |
| G48026 | NA | other | downstream | 550789 | 48281063 ~ 48351285 (+) |
| AMCG00013971 | lamtor5,xip,LOC106566397,LOC107668015 | other | downstream | 803612 | 48533886 ~ 48546200 (+) |
