AMCG00013953


Basic Information

Item Value
gene id AMCG00013953
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 48085959 ~ 48097083 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013953
TCTCCCGGCTGCTGGGGGCAGGCAGACCAGAGACCCCAGGAGCGAGATCTGTAGGGGCCAAGATCGACATCCACACACAAGCCGGGGAAGATTTAAATTCATCGCCTTCGTATCTCAAACAGTGGACTTTCAGCCCCGAAAACTAAACCCTGATGAAATTGCAATCTGatacaattctgttttttttttgtttttttgtttttttagaaaacTTGCTCACTGAGAGGATGAAGGATGAAATTGGGTGGTTTCTGTTGCAGCGCTCCGGACAGGAGCCTCTACCAGGTCAGCAAAAGCTACGACAAGATATAATCAGACAGGAATGCCAAGGGGAACCAACTGGAATTTCAAACATCTTCCACCGGGAGGGGTTTAAAGGACAAGTCCAGCGCACAGGAAGTGTGAAGCTCTACGCCGAACAGGAAGTGTCAGAACGCAACGAGGAAAGCCCTGCAGGGCCGGGGCTGAGCTGCGCTGGAGTCTTGAAAGCCAGCTGCAGGATCGACTGGCGGTTCCAGCTGGGGATCAGGCGGTTACCTACAGAAATCCCACAAAAGCTGCTGTTACGTAAAGCACAGAGGCGGCCCCAGTCCAACGTAAACCGGGGATGGcaggaacaggaaACGGCTGGGATGAGGCGTACACCTGGCTTCGTCCTCACCGAGGGGCTGCAGAGTAATCAACACCCGAGCGCCATATGCTTCCCCGCTGACGGGGAGACAGAAGTTACAAGCGTCTGTGATCTGAGAAACCGAGCCTTTTCAGTTAACCTGAACACAGACATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013953 True 785 mRNA 0.52 5 48085959 48097083

Neighbor

gene id symbol gene type direction distance location
AMCG00013941 LOC106566646,LOC106571888 coding upstream 355685 47724434 ~ 47730274 (+)
AMCG00013939 lrrn2,LOC108425772 coding upstream 542525 47541233 ~ 47543434 (+)
AMCG00013924 etnk2,LOC106565623,LOC107694884 coding upstream 953783 47123708 ~ 47132176 (+)
AMCG00013917 NA coding upstream 1000921 47077860 ~ 47085038 (+)
AMCG00013923 NA coding upstream 1058985 47026485 ~ 47026974 (+)
AMCG00013952 LOC108250382 coding downstream 2593 48099676 ~ 48143917 (+)
AMCG00013951 NA coding downstream 48315 48145398 ~ 48158245 (+)
AMCG00013960 NA coding downstream 130332 48227415 ~ 48234227 (+)
AMCG00013962 NA coding downstream 139680 48236763 ~ 48239245 (+)
AMCG00013963 NA coding downstream 321174 48418257 ~ 48422793 (+)
G47937 NA non-coding upstream 25145 48059915 ~ 48060814 (+)
G47936 NA non-coding upstream 26367 48058733 ~ 48059592 (+)
G47810 NA non-coding upstream 502057 47552159 ~ 47583902 (+)
G47804 NA non-coding upstream 540368 47545192 ~ 47545591 (+)
G47797 NA non-coding upstream 664730 47421016 ~ 47421229 (+)
G47958 NA non-coding downstream 65128 48162211 ~ 48162427 (+)
G47959 NA non-coding downstream 66788 48163871 ~ 48164673 (+)
G47960 LOC107654379,LOC107756628,LOC107573300,LOC107751188 non-coding downstream 67712 48164795 ~ 48165036 (+)
G47961 NA non-coding downstream 71556 48168639 ~ 48169640 (+)
G47972 NA non-coding downstream 82108 48179191 ~ 48179721 (+)
AMCG00013943 NA other upstream 266236 47752214 ~ 47819723 (+)
AMCG00013927 LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 other upstream 857990 47219919 ~ 47227969 (+)
AMCG00013919 LOC102792503,LOC106583503,LOC106565096 other upstream 1012251 47037095 ~ 47073708 (+)
AMCG00013879 dennd2d other upstream 2126765 45943571 ~ 45959194 (+)
G47398 NA other upstream 2144053 45934659 ~ 45941906 (+)
AMCG00013961 NA other downstream 142617 48239700 ~ 48258433 (+)
G48018 NA other downstream 171671 48268754 ~ 48269272 (+)
G48026 NA other downstream 183980 48281063 ~ 48351285 (+)
AMCG00013971 lamtor5,xip,LOC106566397,LOC107668015 other downstream 436803 48533886 ~ 48546200 (+)
G48142 NA other downstream 657870 48754953 ~ 48760712 (+)

Expression


Co-expression Network