AMCG00013958


Basic Information

Item Value
gene id AMCG00013958
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 48186287 ~ 48189302 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013958
ATGGCGGCGGGGACCTCGTTCGTCCCTCCGCTACTGCTGGAGGCCGGGGTGGAGGAGCGCTTCATGACCATGGTCCTGGgcGTTGGCCCGGTGCTGGGGCTGCTGTTCGTGCCCCTGATCGGCGCGGCCAGCGACGGTTGGAAGGGGCGCTTCGGGCGCCGGCGGCCCTTCATCTGGCTGTTGTGCCTGGGGGTGCTGCTGAGCCTGCTGCTCATCCCACAGGCCTCGCGCCTGGCCACGCTGCTGTCCATACCCATGTCGGTGCCGCTCCGCGGGCTAGAGGTGGCGCTACTGGTGGCCGGGATCTGCCTGATGGAGTTCTGTGGCCAGGTGTGCTTCACGCCACTGGAGGCGCTGGTGTCCGACCTGTtccaggaggaggaggagtgcaCCTGGGCCTTCTCCGTGTACTCCCTGATGATCAGCCTGGGGGGCTGCGTGGGCTACCTGCTGCCCGCCGTGCACTGGAACATGGGGCCCCTGATCCCCTACCTGGGGGGCCAGCGGAGCTTCATCTTCCTGCTGCTCACCCTCATCTTCCTCGCCTGCCTGCTGGGAACGCTCTTCATCTCCGAGGAGTCGGACTGGGGGAAGGTGGCATCCCGGGAGGGCGTCCCCAGCATCTGCCCGAGGCTGTGCCCGCACCTGCCCTCGCTGCGCCCCTACTGGCTGCTCTCCCTGCTGAGGGGCTGCCGCTCCTTGCTGCCCCAGCTGTGCCAGGCATGCCGGCGCATGCCCTCTGTGATCCGCCGGCTGTTCGTGGCCGAGCTGTGGAGCTGGATGGCCCTCATGACCTTCATTCTCTTCTATACGGACTTTGTCGGGGAGGCGCTGTACCAGGGGTGTGCCACCTCGGTGCTGCTCTCCCTGTGCATAGAAACGCTGGTGCGCTGGCTGGGCCGCCGTGCCGTCTACCTGAGCAGCGTTGTGCTGCTGGCGCTGGCCACCCTGGTGATGAGTCTCTCCCGCAGCGTCGTCACAGTGACCCTCATGGCGGCTCTGACCGGATACCCCTTCTGTATCCTGCAGATCCTGCCCTACACCCTCACCTCCCTCTACCATAACGACAAGCAGACGTTCTTCCCCCGGACAAAGGACAGAAGCAAGATGGCCGCTGAGGAGAAGTGGAGGTCTGCCAAGGACTTAGTGCCACACATCCTGTACCACGGCAATGGGCACCCGGGCGGGATGCCGGGGCTGGGGCCCACCATGTACGTCTCCATCACCAGAGAGGGCCCCCCCAGCCCGGCCGCGGTGGCACCCACTGTGGGCCGGGGGATGTGCCTGGACCTGGCCATCCTGGACAGCGCCTTCCTACTCTCCCAGGTGGTGCCCTCTCTGCTCATGGGCTCTGTGGTGCAGTACACCGGGAGCGTGTCGGCCTACATGGGCGGCGCCTCCGTGTTCGCCCTCGTGGCCATTTACTTCTCCTCCAGGGTGGTGTTCGACCGCAGAGACCTGGAGCGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013958 True 1470 mRNA 0.66 4 48186287 48189302

Neighbor

gene id symbol gene type direction distance location
AMCG00013956 NA coding downstream 5710 48179895 ~ 48180577 (-)
AMCG00013954 NA coding downstream 9306 48173372 ~ 48176981 (-)
AMCG00013955 NA coding downstream 20625 48160674 ~ 48165662 (-)
AMCG00013948 NA coding downstream 138221 48031392 ~ 48048066 (-)
AMCG00013950 NA coding downstream 161955 48022064 ~ 48024332 (-)
AMCG00013957 NA coding upstream 13277 48202579 ~ 48212028 (-)
AMCG00013959 NA coding upstream 30930 48220232 ~ 48227111 (-)
AMCG00013965 NA coding upstream 72045 48261347 ~ 48264373 (-)
AMCG00013966 NA coding upstream 239601 48428903 ~ 48439128 (-)
AMCG00013972 NA coding upstream 327631 48516933 ~ 48520737 (-)
G47991 NA non-coding downstream 6602 48179267 ~ 48179685 (-)
G47917 NA non-coding downstream 169449 48016561 ~ 48016838 (-)
G47839 NA non-coding downstream 491393 47689845 ~ 47694894 (-)
G47809 lrrn2,LOC108425772 non-coding downstream 640696 47540563 ~ 47545591 (-)
G47807 NA non-coding downstream 690603 47495411 ~ 47495684 (-)
G47995 NA non-coding upstream 26573 48215875 ~ 48216209 (-)
G48021 NA non-coding upstream 80042 48269344 ~ 48270564 (-)
G48025 NA non-coding upstream 87434 48276736 ~ 48277321 (-)
G48044 NA non-coding upstream 119262 48308564 ~ 48344493 (-)
G48047 NA non-coding upstream 140416 48329718 ~ 48339610 (-)
G47896 NA other downstream 211372 47967425 ~ 47974915 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other downstream 317424 47864850 ~ 47868863 (-)
AMCG00013932 ruxe,snrpe other downstream 985390 47188595 ~ 47200897 (-)
G47666 NA other downstream 1310917 46871869 ~ 46875370 (-)
AMCG00013903 NA other downstream 1875169 46299161 ~ 46311118 (-)
AMCG00013964 NA other upstream 176741 48366043 ~ 48375096 (-)
AMCG00013967 NA other upstream 266601 48455903 ~ 48479577 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other upstream 628681 48817983 ~ 48821156 (-)
G48373 NA other upstream 1295198 49484500 ~ 49484767 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other upstream 1305425 49494727 ~ 49498630 (-)

Expression


Co-expression Network