AMCG00013960


Basic Information

Item Value
gene id AMCG00013960
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 48227415 ~ 48234227 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013960
atgtgtgacactgtgtgtgaCAAAAAGCAATGGTGCTCAAGTCTCATCGGTTTCAATGACAAATCACAGCTCACTAACCGGCAGCACGTCACCCTGAGGGGGCGTTTGACCGATTATTTTGAAGACGGACACACAGTATACGAACCTAAAATGGGAAACAAAGcaacaacaacaacaacaacaacaacagcaacaacaacaacaaccacaacaactaccaccacccccccgcccACAACAACATCGTTTCAGTTTACGACTGAAAAAGGTGCAGCAAACTTAAATAGCACGGTGCTCTACACCATCGTCGGACTGTGCTGCGCGCTGGTCCTTATCATCTTCCTCACGGTCGCCCTGCTCTTCTTTCTGAGGAGGCGAGGCAAGGCTTTGGcaaGAACatcagagagaggaggaggacggCTGGCAGACTCTCCTACTGAGAATGGAGCTGGTGGGGAGACACCTGCGGAAATGGTGGAAAACATGGCGTACGGAAACGTCACTTTTTCCAACCACGGGCTGGACCCAGAGGGCTGTGTGATCTACACTGAGGTGACGGCCAGCGCGGGCAGGAGAGAGGTGTCCATGTTGCGCGAAACGTCTGAGTACGCAACCATTGCCAAATGACCTGGGCCGGCACGGGTCGACACGGGGACTGAAGGCTTATCTAGTGTGAAAAGACAAGGTCCGCCACAATCctcagcaacagcagcagtgaaAACACAAACGGCAGCACTCAGTGACCGCAGGATTGCCCGGGCAGCTCAGGGGTGTTCAAACGCATCGTCCACCTAGAAGtgatgaaactgaaatgtaggGAACAGAGTAGCAGCATCAGTCCGTGGTCACTGCAGACGCCAGACCTAGAAGACCTAGATACTCCCCCTGCCTTTGGATGTTGAACCCCATCTTGAGAGACTCTGTAGATGCTGCTAGTAAAACCTGGGCTACCTTGGTCACCGGCAGGATGCGAGGCAGCAGTACAGATTTCACTGCacctgttattgtttttctattttaatgaatCCAATTGCTGTTCAtctacaaaaagcaaaacaaaaatgaaatacccAAAGTGTGTGAGCTTGATCCCTGAATCCACTTATTCCTCACCGCCtgcttgttgtttgtttgttggcttgTCTGTTTGAGTTAAACGGTGGTGTTTCTTGCAGTCCCGAGGTGTAAATCCTGCTCTGTAAAACAAAAGGCTGGTTTCAGCTGCTCTGTATAAATAAACCCATGCCCTGGCCAAAACGTTCAGCATGTACTCCATTAAGAACAGTTGCATGGGTCTGCAAATCACATAGTTCATCTTAGCATGTTCAGCATAAACAACAAAGCAAGTAAAACTGACTGTGTAGTAACCAactcttaattaaaaataagtaagtaaTTAATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013960 True 1404 mRNA 0.48 6 48227415 48234227

Neighbor

gene id symbol gene type direction distance location
AMCG00013951 NA coding upstream 69170 48145398 ~ 48158245 (+)
AMCG00013952 LOC108250382 coding upstream 83498 48099676 ~ 48143917 (+)
AMCG00013953 NA coding upstream 130332 48085959 ~ 48097083 (+)
AMCG00013941 LOC106566646,LOC106571888 coding upstream 497141 47724434 ~ 47730274 (+)
AMCG00013939 lrrn2,LOC108425772 coding upstream 683981 47541233 ~ 47543434 (+)
AMCG00013962 NA coding downstream 2536 48236763 ~ 48239245 (+)
AMCG00013963 NA coding downstream 184030 48418257 ~ 48422793 (+)
AMCG00013969 NA coding downstream 256317 48490544 ~ 48494312 (+)
AMCG00013970 NA coding downstream 268942 48503169 ~ 48504611 (+)
AMCG00013968 slc16a4,LOC106572850,LOC107591855 coding downstream 313027 48547254 ~ 48572929 (+)
G47983 NA non-coding upstream 20712 48206249 ~ 48206703 (+)
G47981 NA non-coding upstream 22596 48202526 ~ 48204819 (+)
G47980 NA non-coding upstream 24972 48200626 ~ 48202443 (+)
G47972 NA non-coding upstream 47694 48179191 ~ 48179721 (+)
G47961 NA non-coding upstream 57775 48168639 ~ 48169640 (+)
G48007 NA non-coding downstream 18552 48252779 ~ 48253145 (+)
G48030 NA non-coding downstream 100330 48334557 ~ 48346350 (+)
G48055 NA non-coding downstream 151963 48386190 ~ 48386491 (+)
G48060 NA non-coding downstream 171376 48405603 ~ 48405818 (+)
G48062 NA non-coding downstream 173256 48407483 ~ 48408809 (+)
AMCG00013943 NA other upstream 407692 47752214 ~ 47819723 (+)
AMCG00013927 LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 other upstream 999446 47219919 ~ 47227969 (+)
AMCG00013919 LOC102792503,LOC106583503,LOC106565096 other upstream 1153707 47037095 ~ 47073708 (+)
AMCG00013879 dennd2d other upstream 2268221 45943571 ~ 45959194 (+)
G47398 NA other upstream 2285509 45934659 ~ 45941906 (+)
AMCG00013961 NA other downstream 5473 48239700 ~ 48258433 (+)
G48018 NA other downstream 34527 48268754 ~ 48269272 (+)
G48026 NA other downstream 46836 48281063 ~ 48351285 (+)
AMCG00013971 lamtor5,xip,LOC106566397,LOC107668015 other downstream 299659 48533886 ~ 48546200 (+)
G48142 NA other downstream 520726 48754953 ~ 48760712 (+)

Expression


Co-expression Network