AMCG00013966



Basic Information


Item Value
gene id AMCG00013966
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 48428903 ~ 48439128 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00013966
ATCCCCCTGATTAAGGGGAAATCTGCAAAGGAGACTCTTCAAGAGCAAGGCCTGTGGGAGGAGTTTAGCAAGAGGTTCCCCTACAACCCAGCAATGAAGTTTAACCCCGAGTATGCCTCTGTTGCCTATGAGCCCATGACCAACGATGCCGGCCTGTCATACTATGGCATCATCTCCATTGGAACCCCCCCCCAGTCCTTCAAGGTCCTGTTCGACACTGGCTCCTCCAACCTGTGGGTGCCCTCTGTCTACTGCAACAGTGCTGCCTGCGGTAACCACAACACATTTAACCCTAGCCAGTCCTCCACCTACCAATCCACTTCCCAGACCCTCTCCATCCAGTACGGCACTGGCAGCATGACTGGCATTCTGGGATATGACACCGTCACCATCGGCAACATTGTTGACACGAACCAGATCTTCGGCCTAAGCGAGACCGAGGCCTCCTTCCAGTACTACATGCCTTTTGATGGGATCCTGGGTCTGGCTTTCCCCTCCATCTCTTCCTCTGGAGCCACCCCCGTCTTCGACAATTTGATGAACCAGGGCCTTGTCTCCCAGGACCTCTTCTCCATCTACCTGAGCGGTGCAGGCGAGACTGGGAGTGTCTTGATACTTGGTGGAATTGATTCTTCTTACTACACTGGCCAGCTTGCCTGGATCCCTCTGTCATCTGAGAGCTACTGGCAGATTAGCATGACTGAGGTCACCATCAACGGGAACGTTGTGGCCTGCTCTGGCGGCTGCCAGGCTATCGTGGACAGCGGTACCTCTCAGGTTGTTGGGCCATCTAGCGACATCAGCAACATCAACGCTTGGGTGGGAGGAGCAACTGTGAATTGCAATAACATTGGAAACATGCCTGATGTAACCTTCACCATCAACGGATATAACTTCAACCTGCCTGCGTCTGCCTATGTCTCTCAGTCCAGCAATGGCTGCTCCACGGGCTTCGGAAGTGGTGACAACCTTTGGATCCTGGGAGACGTCTTCATCAGGGAATACTTTGCCGTCTTTGACAGAGCCAACAACATGTGGCTCGTGCTGCTTGCCCTCATTGGGCTGTCTGAGTGTCTCTTTAAGGTCAGCCTACAGAAGGACAAGTCTGTGAGGGATATCCTGGAGGAGAAAGGTCTGCTGGAAGACTTCCTGAGGAGGAACCCTTATAACCCCTACACCAAATTCCAAGGCTTTGCTCAGACCGGCAATGAGCCCATGATCAACTATCTAGATATGTCCTACTTTGGCACCATCTCCATCGGAACCCCCCCTCAGACCTTCAAGGTGATCTTTGATACTGGATCTGCCAACCTGTGGGTGCCGTCGGTCTACTGCAACAGCTACGCCTGCTCCAACCACAAGAAGTACAACCCGTCCCTTTCTTCCACCTACCGCCCCACCAATCGCTACATGTCCATCCAGTATGGAACAGGCAGCATGACTGGCTTCCTGGCCTATGAGACAGTGAACGTTGCCGGCATTGAGGACCCCAACCAGCTCTTTGCCCTGAGCACTACGGAGCCGGGCAGCTTCCTGTACTATGCCAAGTTCGATGGGATCCTGGGTCTGGCCTTCCCCTCCATCGCCTCCGGTGGAGCCACCCCAGTCTTCGACAACATGATGAAGCAGGATCTGGTCTCTCAGGACCTCTTCTCCTTCTACCTGACCCCACACGGTCAGCCTGGCAGCACACTGACCTTCGGCGGTATTGACACGTCATACTTCACTGGCCAGATCAACTGGGTTCCCCTGACCTCCGAGAGCTACTGGCAGATCAAGGTGGACAACATGAGGATGAATGGTCAGGTGGTTGCCTGTGCTCAGGGATGCCCAGCCATCGTTGACACTGGCACCTCACTCATTGCTGGACCTTCTGGCGATATCTCGAGCATCCAGAAAACACTGAACTACTATATGAACTGCCAGGACGTGGCCAGCATGCCCGACTTCGTTATCAGCATCAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00013966 True 1965 mRNA 0.54 16 48428903 48439128

Neighbor


gene id symbol gene type direction distance location
AMCG00013965 NA coding downstream 164530 48261347 ~ 48264373 (-)
AMCG00013959 NA coding downstream 201792 48220232 ~ 48227111 (-)
AMCG00013957 NA coding downstream 216875 48202579 ~ 48212028 (-)
AMCG00013958 NA coding downstream 239601 48186287 ~ 48189302 (-)
AMCG00013956 NA coding downstream 248326 48179895 ~ 48180577 (-)
AMCG00013972 NA coding upstream 77805 48516933 ~ 48520737 (-)
AMCG00013973 NA coding upstream 83422 48522550 ~ 48524089 (-)
AMCG00013974 rbm15,LOC102786942 coding upstream 146503 48585631 ~ 48588321 (-)
AMCG00013976 NA coding upstream 212161 48651289 ~ 48663453 (-)
AMCG00013979 LOC106565664 coding upstream 306765 48745893 ~ 48754827 (-)
G48044 NA non-coding downstream 84410 48308564 ~ 48344493 (-)
G48047 NA non-coding downstream 89293 48329718 ~ 48339610 (-)
G48025 NA non-coding downstream 151582 48276736 ~ 48277321 (-)
G48021 NA non-coding downstream 158339 48269344 ~ 48270564 (-)
G47995 NA non-coding downstream 212694 48215875 ~ 48216209 (-)
G48082 NA non-coding upstream 22398 48461526 ~ 48498711 (-)
G48086 NA non-coding upstream 40320 48479448 ~ 48484310 (-)
G48092 NA non-coding upstream 66743 48505871 ~ 48506136 (-)
G48106 NA non-coding upstream 106109 48545237 ~ 48546275 (-)
G48175 NA non-coding upstream 206062 48645190 ~ 48651229 (-)
AMCG00013964 NA other downstream 53807 48366043 ~ 48375096 (-)
G47896 NA other downstream 453988 47967425 ~ 47974915 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other downstream 560040 47864850 ~ 47868863 (-)
AMCG00013932 ruxe,snrpe other downstream 1228006 47188595 ~ 47200897 (-)
G47666 NA other downstream 1553533 46871869 ~ 46875370 (-)
AMCG00013967 NA other upstream 16775 48455903 ~ 48479577 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other upstream 378855 48817983 ~ 48821156 (-)
G48373 NA other upstream 1045372 49484500 ~ 49484767 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other upstream 1055599 49494727 ~ 49498630 (-)
G48506 NA other upstream 1280637 49719765 ~ 49721526 (-)

Expression



Co-expression Network