AMCG00013990


Basic Information

Item Value
gene id AMCG00013990
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 48851288 ~ 48852970 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013990
ATGAGGCGCGTTTTGGGTTTTCGTTGCAGCTGCAGTTCTTGCGATGGTGGCAGGGATCCCAGAGGCAGCGCGGCAGCCCCGTACTGTGAGAAGCACCTGACTGCGGACCTCCTCGCTCTGCGCACCCCCCCCGCCATGCAGTCCCCGAGCCGCGCGGCTGGGGACCCCTCGTCCAGTGTCCTGATACAGGACCGCTCTCCCGGGACCTCAGCGGCCCGCCTCCTCCTCCGCGCCGCCCTGCTCTCTCTGGCCCTGCTGGCGCTGCTGCCTCTTGGGTCCGCGGCTCTGACCCCGAACTACAATGTGTGCATCTGCGCCAGCAACATCGTGAGCTGCTCCAAGATGAACCTGACCACCATCCCCAGCTCCCTGCCCACGTACACGGCCGTGCTGGACCTCAGCTTCAACTCCATCAGCAGGCTGACGGCCGAGTGGACCAAAGTGAAGCTGCTGAAGCTGCACAACCTCCTGCTGAACCAGAACAGCATGAGCTTCATCTCGTCTGAGGCCTTCCTGTACGTAACCAAGCTGCGCTACCTGGACCTGTCCTCCAACAAGCTGCGGCAGCTGGACGAGTTCCTATTCGAGCCTCTGGAGCAGCTGGAGGTGCTGCTGCTCTACAACAATCACATCTCCCAGATCGACCGCTCCGCTTTCTCTGGCCTCAACAGCCTGCATAAGCTGTACCTGAGCCAAAACCAGCTGTCCCGCTTCCCCCTGGAGCTGGTCAAGGACAAGACCCGGCTGCCCAAACTCAGCCTGCTCGATGTCTCCTCCAACCGGATCAAAGTGCTGCCCATCCAGGACTTGAAAGCGCTGCCGGCCTGGATCAAGAACGGCCTCTACTTCCACAGCAACCCGATCGCATGTGTCTGCGAGCTCTACAGCCTGCTGGCACTCTGGCACATCCGGCGGCTCAGCTCCGCCGTGGACTTCAAGGACGACTACACCTGCACCTTGCCGGGCCCCCAGAAGGTCAGCGTGGGCGTCTTCCAGCTCAACGGGGACCATATGAACTGCAGCGCGGTGAAGGAGGCAGACGAGGAGGCCTACCTGGACCAGATGCTCACCCTCAGCTGCGACACGCGCCACAGGGACATGGTCAAGACCTGGGTGACGCCCAACAACGTGGTGGTGACCAACGTCAGTACCAACCACACCAACCTGGTCTTCAACAAGGACAGCCTGCAGATCCGGCTGGTGCGGCCCGAGGACTCGGGGGTGTACACCTGCTTCGCCGTGAGTACCTCGCTCAACGAGACGCTGTACGTGACGGTCAAGGTGCACAATGTCACGATGCACGGCGGCAACAACACCCTGAACACGGCCTACACCACCCTGGTGGGCTGCCTGGCCAGCGTGGTGCTGGTGCTTATCTACCTGTACCTGACGCCCTGCCGCTGCTTCTGCTGCCCGGGCAGCGGCAAGGCCAAGAGCCAGCAGGAGGACAGCATCCACTCCTCCATGCTGAGCACCACGCCCACCCACGACGTGCTGAGCAAGGCGGGGCTCAGCAGACACGTGGCCTTCATCGAGCCTTCCAAAGACCTGCAGGGCCAGAACGGCAAGGTCAACCCCGCCGCGGAGGACAGGCCGGAGAGCTCACGGGAGCGGGGCCAGAGGAAGAGGTCGGACGCAGAGTCCATCAGCTCCGTGTTTTCCGACACCCCCATAGTGGTGTAA

Function

GO: NA

KEGG:

id description
K22529 AMIGO; amphoterin-induced protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013990 True 1683 mRNA 0.63 1 48851288 48852970

Neighbor

gene id symbol gene type direction distance location
AMCG00013986 NA coding downstream 43701 48795219 ~ 48807587 (-)
AMCG00013987 NA coding downstream 58413 48792374 ~ 48792875 (-)
AMCG00013981 nfya coding downstream 66063 48776500 ~ 48785225 (-)
AMCG00013980 LOC100690806,LOC102789655 coding downstream 75150 48757586 ~ 48776138 (-)
AMCG00013979 LOC106565664 coding downstream 96461 48745893 ~ 48754827 (-)
AMCG00013994 gnat2,LOC107591823,LOC102304204,LOC100703259,LOC102200492,LOC101158106,LOC103367853 coding upstream 65427 48918397 ~ 48925913 (-)
AMCG00014000 NA coding upstream 440157 49293127 ~ 49298717 (-)
AMCG00014003 NA coding upstream 449652 49302622 ~ 49310125 (-)
AMCG00013998 NA coding upstream 459340 49312310 ~ 49317429 (-)
AMCG00013999 NA coding upstream 467201 49320171 ~ 49326142 (-)
G48175 NA non-coding downstream 200059 48645190 ~ 48651229 (-)
G48106 NA non-coding downstream 305013 48545237 ~ 48546275 (-)
G48092 NA non-coding downstream 345152 48505871 ~ 48506136 (-)
G48082 NA non-coding downstream 352577 48461526 ~ 48498711 (-)
G48275 NA non-coding upstream 174314 49027284 ~ 49050432 (-)
G48363 NA non-coding upstream 500722 49353692 ~ 49354535 (-)
G48370 NA non-coding upstream 600063 49453033 ~ 49453872 (-)
G48398 NA non-coding upstream 684758 49537728 ~ 49595073 (-)
G48430 NA non-coding upstream 760726 49613696 ~ 49613974 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other downstream 30132 48817983 ~ 48821156 (-)
AMCG00013967 NA other downstream 371711 48455903 ~ 48479577 (-)
AMCG00013964 NA other downstream 476192 48366043 ~ 48375096 (-)
G47896 NA other downstream 876373 47967425 ~ 47974915 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other downstream 982425 47864850 ~ 47868863 (-)
G48373 NA other upstream 631530 49484500 ~ 49484767 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other upstream 641757 49494727 ~ 49498630 (-)
G48506 NA other upstream 866795 49719765 ~ 49721526 (-)
AMCG00014033 NA other upstream 868776 49721746 ~ 49724237 (-)
G48510 NA other upstream 875534 49728504 ~ 49729055 (-)

Expression


Co-expression Network