AMCG00013999


Basic Information

Item Value
gene id AMCG00013999
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49320171 ~ 49326142 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013999
CGGCAATGTGAGGCGCAGGCGCAGTGCGGAAGTGGGAAGTTTGCTACAGCTGTGCGGAGCAGGTGGGTCGAGCCAGGCAGAGTAAACAACTCAAACTTTACAACTCACAATTCACCCATATCACACTTACACCGGTGAGAGTGACGTCTCCACAGCTCGGTCGCAGGAGGATGCGAGTGGACGCGGAGCCCCGGGATCTGGGATGACAGCGGCGGAGACGCAACACGCTGCTCTGGACTGGATGCACAGTGGTATCTGTAATCACCCGCTGTAGAGCCGCGCTGTGTCGAGCAATCATCGCATTCGTTCAtcgttttattaatttgttggTGTTTGTTAAAGCACATCTGGAATATGCACTCTATCTGGAATAGGGTTTAAATATGCACGTCTAGAGACAGTCCTGCAGCGGGATCCTCGGACAGATAACGGGCAGGTGGGCAGGTGATATATAGCGCCATGACGCTCTGCTCTCCGGAGCGCCACTGACCGTCGCGATCCCCCGGGACATGTGCGCCACTGAAGTCCACTGACGCGAGGGGCCGGACTGCACCCAGCCATGGGCATGGCCCCCAGCGAGCCGTGCATCTACGACAAGCTCTCGGAGAGCATCGACATCCTGCGCCAGTCGGGCTACCGCTACGGTATGTCGGAGAGGGAGATCGAGAAGTTCATCAAGCAGGTCCTGGAGACCAACGAGCCCCGGCGGGACCCGCCTCAGTTCCCCATCCTGCGGGCCACGCTGAAGTTTGTAGTTGCTGTGGGGTTCCTGTTGGTGGCAGTGCTGGTCTTCACCTACCCTCACAGCCCCCCCCAGCCAGGCCTGGCGCTGTTGGGGAGGCACAACTGGTCCTCACCCCTGGCCCACGTGCGCCTGCTGTCGCTGCCCATCGCCAAGAAGTACAACCTGCAAGAGTTCCAGGTGTGGTGGAGTGCCCGGGGGGGGGTGCCAGTGAACTGCTCGGGCTGTGCGGGGGTGACGGCAGTcctggaggtgggggggagacATGGCTTCCCCAGGGGACCCCACCCGGTTCTTGTCAAGggCCGGGAGGACCTGGCTGTGACCTACCAGCACCTGCAGCAGCTGTTTTCCCAGCACCGGGAGTCAGTGAGCGTGCTGctgatgggggaggggggcgaGGAGGTCCGGGCCGAGGGCATCCCACTGGAGCCATCCAACTTCACCCTGCTGTGGTGGGAAGAggtgctgcagctgctgttcCCAGGGCTGGAGCGCTGCCCCCTGTGGGGCGGGGAGGGTCTGTCCCTGCAGCGCTGCCTGGTCACACACAGCACGGGGCCACAGAGCCGGGCCCAGCGTGTGTACCAGTGGCTGGTTGTGGGAGAGGGGCTCCCGTCTCTCAGAGTCTTGCCCGTCCCTCACTGTCACAAACTCTGCAGCTCTTTTAACCTGTGGCTGGGGCCCGGGGACATGGTCTACGCGGACTCACGGCTCTGGTTCATGGACCTGTTTCCCGGCCGGGGGCAGAACGTCGTGTGTGACGGACCCGGTTTCTGAGACGCCCCGAGAGAGATGTGACTGAGCCAGGCTGGACACACAAgcgcacacaccacacacacacacgcacacgcagaaCAGAGATGAAGAGACGCACATGCATGCAACACACGGACACAAGTACAGTCGGATGCACGGGAGACGGACCCCGCTGGACAGACCACCCCACGCTGCAGGGGACTCGTCACGGAGGGGGCAGCGCCAGGGGTTGGGGAGGGGTTCaccacataaaaacacaccCCTGTGCTCCCTTGTAAAGAGACGGTTCATTTTTCCctcattggtttatttattgtttttcttacaaGCGCTGGCTTTGTTTTCGAAGACGCACAACTGCCCTCCGTTCCCCTATGAGTGCTACGACTCGCATGTTTACATTGATGtataattctttattttaatctttctgttGTCAAAGCCGAGTGAAAGAATGAATGTCAGAGAAGAGAGGGAGCGACTTTAAGAtagatacataaaaataattgtaatttctgTAACCTTTTTGCATCCGGGTCTCTGACTGCAGTCCGCCCGTCCCAGTCTGTGCTCGGCATGCGCATTGCGTTCGGGTCAAGGGCCAAACGAGATGTTGAAGTGTGTGTTAGTTTTTgttctgtgatttattattattggtattattattgttattttttaacgtGCTGGCTCGCGGCCAAGGTGTTCTGTGTGGGAGCAGCTGGTTTCCAACAGGTGCTGACGCAGCGTAGCCTGACACAAGTGTCCTTACTACAGACGCCCCCCCGCCCAGGGCTCCAGTGCGGCGCTGCTGACCAGTGCAGACTGCACACAGGAGGCAGAGTGCCATGTTTTTCTGAGCTGTTTTACTGGAGACTCAATGGACTTCATCCCGAAGCGCGTTTTCATGTTTTGCTGGGTTGTTTTTCCTGGACGGCCAGCTGTGTGTGCAGGATGACATCACACCGACTGCCGCCCCAGGGTGGGGTCCCCACATCTGTCTCCTGGAGCACACTGCGAGGTCACAGTCTCCCGGGTCCCGCTCTCCTCCTCCAGTCCCCCCTCCACCCTGCACATCTGGAACCCGTCAGCCTGTTGTTGTGAACTGAGCTGTACTAGAGTcctgtgttatttttattaaaaatgtataatttattaatataggcagggtttttctttttgtcctgAGTCTCTGTGAggaccctccctctctctacgCCTCCTTGAGGAAGGTCATGACCTTTCTCCCTCTCGGCCAGGCTTGTCCAAAGTAGAGGGTTGgacagtgtttgtgtgcaggACGGTCCGGCGATGTttctgcctttctctctctccctctaatCCTCTTTTCTATCATGGTTTCTGGTTTGGTTTCGTTCCTTTGAACAGCTTTGCCTTCCCTGTGGGTTCGGGTCCTGGGCCGCCCCTGGTTGTGGCCACAGCAATTCATGCTCTGACTGCGCTGTTTGGTCTCGTATCTGAGTAGGGGGATTGTGTGCGCGGTGAGGCTGTGTACATAACTTAAAGAGTACGAATCTCTGATGTAAAAaggatgtctgtgtgtgtgtatacaaaacacatttgtatgtaAGCTATaattgttttggtgtttttttttttccccctccaacCACAGAAAGTTTGATTAatgtttataatgaataaaaacGTTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013999 True 3174 mRNA 0.56 8 49320171 49326142

Neighbor

gene id symbol gene type direction distance location
AMCG00013998 NA coding downstream 2742 49312310 ~ 49317429 (-)
AMCG00014003 NA coding downstream 10046 49302622 ~ 49310125 (-)
AMCG00014000 NA coding downstream 21454 49293127 ~ 49298717 (-)
AMCG00013994 gnat2,LOC107591823,LOC102304204,LOC100703259,LOC102200492,LOC101158106,LOC103367853 coding downstream 394258 48918397 ~ 48925913 (-)
AMCG00013990 NA coding downstream 467201 48851288 ~ 48852970 (-)
AMCG00014002 NA coding upstream 1300 49327442 ~ 49330861 (-)
AMCG00013997 NA coding upstream 21142 49347284 ~ 49352698 (-)
AMCG00014001 itpr3,LOC106572092,LOC107731245 coding upstream 28820 49354962 ~ 49385651 (-)
AMCG00014007 arl8a,LOC107671521,LOC107569762,LOC105900530,LOC107750681,LOC107722853 coding upstream 130485 49456627 ~ 49463170 (-)
AMCG00014008 NA coding upstream 138297 49464439 ~ 49470132 (-)
G48275 NA non-coding downstream 269739 49027284 ~ 49050432 (-)
G48175 NA non-coding downstream 668942 48645190 ~ 48651229 (-)
G48106 NA non-coding downstream 773896 48545237 ~ 48546275 (-)
G48092 NA non-coding downstream 814035 48505871 ~ 48506136 (-)
G48086 NA non-coding downstream 835861 48479448 ~ 48484310 (-)
G48363 NA non-coding upstream 27550 49353692 ~ 49354535 (-)
G48370 NA non-coding upstream 126891 49453033 ~ 49453872 (-)
G48398 NA non-coding upstream 211586 49537728 ~ 49595073 (-)
G48430 NA non-coding upstream 287554 49613696 ~ 49613974 (-)
G48433 NA non-coding upstream 292135 49618277 ~ 49618955 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other downstream 499015 48817983 ~ 48821156 (-)
AMCG00013967 NA other downstream 840594 48455903 ~ 48479577 (-)
AMCG00013964 NA other downstream 945075 48366043 ~ 48375096 (-)
G47896 NA other downstream 1345256 47967425 ~ 47974915 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other downstream 1451308 47864850 ~ 47868863 (-)
G48373 NA other upstream 158358 49484500 ~ 49484767 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other upstream 168585 49494727 ~ 49498630 (-)
G48506 NA other upstream 393623 49719765 ~ 49721526 (-)
AMCG00014033 NA other upstream 395604 49721746 ~ 49724237 (-)
G48510 NA other upstream 402362 49728504 ~ 49729055 (-)

Expression


Co-expression Network