AMCG00014000


Basic Information

Item Value
gene id AMCG00014000
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49293127 ~ 49298717 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014000
ATGCAGCTCCTGATCATCATGGTGATCCTGTCAGGTAAAGACAGCGTCTCCCTGTGCTGGACTCTCAATATGGGCTTTCACACGTCACAGGACACTGTGCATCAGAGGACAGGACAACAGCGAGGCTTGGTGGTGACCTCAGGATTTCAGTCTCCAGACAAGGGGAGTGCCCATTCTGGGTCAATATGGGGTCCAGAGCAGGTGAGCGGTGTGGTCCACAGCACAGTGACTGTACTGTGTGAATTTGATGATGGCTATAGACAGCATGTGAAGTACTGGTGTAGAGGATCATATCTAACTAATTGTACAACACTGGCGAAGACTGGTGGCTCTGTGACAGACAGCAGGGTTTCCCTCAGTGAAGATCAGTCAAGGGGAACGCTCTTGGTCACTATGAGGGATCTGAGACCGGAGGATGAGGGCCAGTACTGGTGTGGGATATCAAGACCAGGAATACTGACAAGTGATGATGGTGCTGCTGTGTACGTTAACATCAACAGAGGTGCCACAACACTAGATCTTCAGGGTCCTGAGAAAGTCACTGGACAGCTATCTGCTGAGATGACAATCCACTGTCTCTACTCTGAAGACTATGAGACTCACACAAAGTACTGGTGTAAAGGAAACAGGCAAATAGACTGCAGCATTGTTGGGACCACCGATTCCCCACAGACTCGAGACAGGACTTCAATCAGAGATGATCGGACCCGCAGAGAGTTCACCATCACTGTCAGGGACCTCAGAGCTGAGGACGAAGGCTGGTACTGGTGTGGAATAAGGAGAACCTTCATTGATAAACTGGTCCCTGTGTACCTGTCTGTCAACTCAGcaacacaaccTGGATCCACTGAAGCTCTGGACACAACCACAGCCAGAGAGGACCCCACAGTGACCAGAGCTGGACCCACACCTGCTCCCACCTCCAGAACCGAGGAGCCAAGCCCCCACACCGTCCCCGTGGTGCTCGGAGTGAGCTTTGGAGTCCTGCTGTCCCCGTGTGTCCTGACCCTCATCATCACTAGGAAGATGCACACCCTCGACTGGTACAGAGGTGACCTACGCGACAGTGACGGCAGTGAGCAGCACACAGCCCCAGAGAGACAGCAGCACCTACGCCAACATCAGCTTCTTTCCCCGGCCGCCCTCAGAggacactgtgctgtactccACCGTCGCGCTCTGAGGGGCTCTGGACTTCATGTGCAGGAGGAAGAGCACCCAGAGATGACCGTGACAACTTCCTGTTGGATCACTGTGCTTTGATTGACTCCTATGTTCTcatcataatttatttcttagcagacagcTAAGCCTGCAGCCATCACAGAGTACACACATCAAGGGACACGGCACAGAAAACACAAGAGAAGCTCAGAGCAGAGACATCATaatgatgttttaaataaatatatatttaaaaataaaaatgcctttcCTGTATCAGCCTggtcttatttattatttgttaaaatacattaatttcatttatttagcagACTCACATTCAAAGGGAAAGcagcattttaaacacacaacactgtaaaGTGTATTCCAGCCCCTGAGTCAAACATTTCCAGTGGTGAGCAGAGAAAGCAGGATGTATACATTACAGCATATTTTAAAGCAAGATATTCAGAACAAAAATAGTGATGAATGCAATACCTCTTTAACAAGTGCTTTTCCTGATTCAGTCTTTTAATTACTATGAGAAATGGAGCTGTTGCCAATCAAGCTGGACATCTAAGACAATGATGTTCAAACCCTCCCTTGCAATTCTCTTTTAAAGTGCTTTAGGTACCTCTGCAGGTTGACTTTAGTCCGAATGGCAAATTCGTCTGTGTGGTTTCAatctttataaaatacatgacTTACTGCTCCCGTTTCATTTAACAGtgttcacagcactgcacagcaaACTGCTCTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014000 True 1926 mRNA 0.48 6 49293127 49298717

Neighbor

gene id symbol gene type direction distance location
AMCG00013994 gnat2,LOC107591823,LOC102304204,LOC100703259,LOC102200492,LOC101158106,LOC103367853 coding downstream 367214 48918397 ~ 48925913 (-)
AMCG00013990 NA coding downstream 440157 48851288 ~ 48852970 (-)
AMCG00013986 NA coding downstream 485540 48795219 ~ 48807587 (-)
AMCG00013987 NA coding downstream 500252 48792374 ~ 48792875 (-)
AMCG00013981 nfya coding downstream 507902 48776500 ~ 48785225 (-)
AMCG00014003 NA coding upstream 3905 49302622 ~ 49310125 (-)
AMCG00013998 NA coding upstream 13593 49312310 ~ 49317429 (-)
AMCG00013999 NA coding upstream 21454 49320171 ~ 49326142 (-)
AMCG00014002 NA coding upstream 28725 49327442 ~ 49330861 (-)
AMCG00013997 NA coding upstream 48567 49347284 ~ 49352698 (-)
G48275 NA non-coding downstream 242695 49027284 ~ 49050432 (-)
G48175 NA non-coding downstream 641898 48645190 ~ 48651229 (-)
G48106 NA non-coding downstream 746852 48545237 ~ 48546275 (-)
G48092 NA non-coding downstream 786991 48505871 ~ 48506136 (-)
G48082 NA non-coding downstream 794416 48461526 ~ 48498711 (-)
G48363 NA non-coding upstream 54975 49353692 ~ 49354535 (-)
G48370 NA non-coding upstream 154316 49453033 ~ 49453872 (-)
G48398 NA non-coding upstream 239011 49537728 ~ 49595073 (-)
G48430 NA non-coding upstream 314979 49613696 ~ 49613974 (-)
G48433 NA non-coding upstream 319560 49618277 ~ 49618955 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other downstream 471971 48817983 ~ 48821156 (-)
AMCG00013967 NA other downstream 813550 48455903 ~ 48479577 (-)
AMCG00013964 NA other downstream 918031 48366043 ~ 48375096 (-)
G47896 NA other downstream 1318212 47967425 ~ 47974915 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other downstream 1424264 47864850 ~ 47868863 (-)
G48373 NA other upstream 185783 49484500 ~ 49484767 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other upstream 196010 49494727 ~ 49498630 (-)
G48506 NA other upstream 421048 49719765 ~ 49721526 (-)
AMCG00014033 NA other upstream 423029 49721746 ~ 49724237 (-)
G48510 NA other upstream 429787 49728504 ~ 49729055 (-)

Expression


Co-expression Network