AMCG00014006


Basic Information

Item Value
gene id AMCG00014006
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49482042 ~ 49486442 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014006
ATGGACACATTTATGGCCAACTCTTCTGTAAATAACATGAGGAACGCCACGCTGCTCTGCCTCTTCAGCTTAAACAACACCATCCCGGCTGACAGAGTCTCGGTGCTCTGGGTGAAATGGATAGAGCCCCAAGACACAGTTGTGCTGCTTTATGAAAACGGGATGAGACAGCCGTGCAGAGAGGACCCGGCCTATCGCAACAGAAGCAGCCTGCTGCACGATGTAGCCCTGGGGGACGCCTCCATCCTGCTGAGGAACGTCTCTCTCTTGGACGCTGGGAGCTACAGCTGCAGAGTGGGGAGCCCAGACTCCGGCATCTATGCTGAGGGAAACCTGACTCTCTCTGTGGCCGCGAAGGCCTCAAACTGGACCTTTGGGTATAATGTGGATAAGAGCCTCTACTTCCAGTCCCCAGGGTGGTATCCTGCACCCGTCATTTTCTGGACAGACAAGAACAACAGGAAAGTCACAGAGCCCTTTGAAACCCACTGCACTCTAAGGGAAGATGGACTTTACAACATCTCGTCCACTCTTTTTCACACAGCCACCGACCACAGCAGGATTGTACACATAGTGTACATCAACCCGCTCACTGGAGAGCAAGAGACTGACCATTACCACCTAGAACATTCAGACTTCACAGCCAATCTCAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014006 True 657 mRNA 0.53 4 49482042 49486442

Neighbor

gene id symbol gene type direction distance location
AMCG00014008 NA coding downstream 11910 49464439 ~ 49470132 (-)
AMCG00014007 arl8a,LOC107671521,LOC107569762,LOC105900530,LOC107750681,LOC107722853 coding downstream 18872 49456627 ~ 49463170 (-)
AMCG00014001 itpr3,LOC106572092,LOC107731245 coding downstream 96391 49354962 ~ 49385651 (-)
AMCG00013997 NA coding downstream 129344 49347284 ~ 49352698 (-)
AMCG00014002 NA coding downstream 151181 49327442 ~ 49330861 (-)
AMCG00014011 NA coding upstream 19024 49505466 ~ 49522620 (-)
AMCG00014012 NA coding upstream 71362 49557804 ~ 49558760 (-)
AMCG00014023 NA coding upstream 109341 49595783 ~ 49607194 (-)
AMCG00014024 NA coding upstream 191878 49678320 ~ 49680362 (-)
AMCG00014034 taf8,LOC106572622,LOC107756368 coding upstream 203237 49689679 ~ 49694164 (-)
G48370 NA non-coding downstream 28170 49453033 ~ 49453872 (-)
G48363 NA non-coding downstream 127507 49353692 ~ 49354535 (-)
G48275 NA non-coding downstream 431610 49027284 ~ 49050432 (-)
G48175 NA non-coding downstream 830813 48645190 ~ 48651229 (-)
G48106 NA non-coding downstream 935767 48545237 ~ 48546275 (-)
G48398 NA non-coding upstream 51286 49537728 ~ 49595073 (-)
G48430 NA non-coding upstream 127254 49613696 ~ 49613974 (-)
G48433 NA non-coding upstream 131835 49618277 ~ 49618955 (-)
G48437 NA non-coding upstream 135655 49622097 ~ 49623191 (-)
G48439 sars,LOC107697960,LOC107671868,LOC107706967 non-coding upstream 137368 49623810 ~ 49627767 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other downstream 660886 48817983 ~ 48821156 (-)
AMCG00013967 NA other downstream 1002465 48455903 ~ 48479577 (-)
AMCG00013964 NA other downstream 1106946 48366043 ~ 48375096 (-)
G47896 NA other downstream 1507127 47967425 ~ 47974915 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other downstream 1613179 47864850 ~ 47868863 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other upstream 8285 49494727 ~ 49498630 (-)
G48506 NA other upstream 233323 49719765 ~ 49721526 (-)
AMCG00014033 NA other upstream 235304 49721746 ~ 49724237 (-)
G48510 NA other upstream 242062 49728504 ~ 49729055 (-)
G48516 NA other upstream 258504 49744946 ~ 49747551 (-)

Expression


Co-expression Network