AMCG00014008


Basic Information

Item Value
gene id AMCG00014008
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49464439 ~ 49470132 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014008
ATGTCCGTTCCTGCTCCCCGGCCTGCATTCCTGCTGCTCCCCTCCTCCGCCTCCTGCTCCCCCACTGGGCCTGGACGGACCTGCCACCCGCGCACCGACCACAGCTACAGCAGCAGACACGCACGCggacacgcacatgcacacggaCACAGGGTGTGTGCGGCCGCAATCTCCGCGGCCTGTCCCTGCTCTGGCACAGCTCAGCACCTGGCCGCAGGTGAGTGTGCCAGATCTCTGCCTAGCAACGCCCTGAGAGGACGAGGCGGAGAGGTGCTACGCAGGGGAGTGCTGGGGCTGGATCTCCGCTCCAGGCTGGGACCGGTGATCACACTGCACACCCTGCGCAACAGTCACCGCCCCCTGAGCGCCACCGAGCTGCTGGACGCCGCGGCCGCCACCGCCACCCTGGAGCAGGAGTACCTgAAAATCCCGCCAAACTTTGTGGATCAGGCCGAGCTGGACATCCCTGGCCGTGCCTTAAAGGACCGATACAAAACCATCCTGCCAAGGACGGCGCTGCACTGTGGTAACTGTCAGAAAACCACACAGCGGCGGTTTGGAAATGGAAGGAGAAGTGTGAACCCAGCTTCCTGCGCAGCAATGGGCTACGGTGGCACTGAGAAGAGCTACATCGCCACACAGGGCCCCATGGTCAACACTGTGTGTGACTTCTGGGAGATGGTGTGGCAGGAGAAGAGCCCGGTCATAGTGATGATCACTAagctgaaggagaagaaggagAAGTGCGTCCTTTACTGGCCAGAGAAGGAATCGACGTACGGCCGCTTCGAGGTGTGCGTGAACGGCGTGCGAGAGTGTGATGGCTACACGATACGGGACCTCACCGTGCAGAGTGAGAGCCTCCGGGTGAAGCATTACTGGTACTGCTCCTGGCTGGACCACCAGACGCCAGCCTGCGTGAAGCCTGTGCTGCGGCTGGTCCAGGAGGTGCACGAGACCCAGCGGGCCCTGAGCAGCCAGGGCCCCACCATTGTCCACTGCAGTGCAGGGATTGGCCGCACGGGCTGTTTCATTGCAACCAGTATCGGGTGTCAGCAGCTGGAGAAGACGGGCCAAGTGGATGTCCTGGGCATCGTGTGCCAGCTGAGGATTGACAGACTCAAGGACAACAACCCGCCCTCTGCACCTTCTCTGCAGGAAGGAGCAGAGCTCTGA

Function

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0004721 phosphoprotein phosphatase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014008 True 1176 mRNA 0.62 9 49464439 49470132

Neighbor

gene id symbol gene type direction distance location
AMCG00014007 arl8a,LOC107671521,LOC107569762,LOC105900530,LOC107750681,LOC107722853 coding downstream 1269 49456627 ~ 49463170 (-)
AMCG00014001 itpr3,LOC106572092,LOC107731245 coding downstream 78788 49354962 ~ 49385651 (-)
AMCG00013997 NA coding downstream 111741 49347284 ~ 49352698 (-)
AMCG00014002 NA coding downstream 133578 49327442 ~ 49330861 (-)
AMCG00013999 NA coding downstream 138297 49320171 ~ 49326142 (-)
AMCG00014006 NA coding upstream 11910 49482042 ~ 49486442 (-)
AMCG00014011 NA coding upstream 35334 49505466 ~ 49522620 (-)
AMCG00014012 NA coding upstream 87672 49557804 ~ 49558760 (-)
AMCG00014023 NA coding upstream 125651 49595783 ~ 49607194 (-)
AMCG00014024 NA coding upstream 208188 49678320 ~ 49680362 (-)
G48370 NA non-coding downstream 10567 49453033 ~ 49453872 (-)
G48363 NA non-coding downstream 109904 49353692 ~ 49354535 (-)
G48275 NA non-coding downstream 414007 49027284 ~ 49050432 (-)
G48175 NA non-coding downstream 813210 48645190 ~ 48651229 (-)
G48106 NA non-coding downstream 918164 48545237 ~ 48546275 (-)
G48398 NA non-coding upstream 67596 49537728 ~ 49595073 (-)
G48430 NA non-coding upstream 143564 49613696 ~ 49613974 (-)
G48433 NA non-coding upstream 148145 49618277 ~ 49618955 (-)
G48437 NA non-coding upstream 151965 49622097 ~ 49623191 (-)
G48439 sars,LOC107697960,LOC107671868,LOC107706967 non-coding upstream 153678 49623810 ~ 49627767 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other downstream 643283 48817983 ~ 48821156 (-)
AMCG00013967 NA other downstream 984862 48455903 ~ 48479577 (-)
AMCG00013964 NA other downstream 1089343 48366043 ~ 48375096 (-)
G47896 NA other downstream 1489524 47967425 ~ 47974915 (-)
AMCG00013946 golt1a,got1a,LOC106565310 other downstream 1595576 47864850 ~ 47868863 (-)
G48373 NA other upstream 14368 49484500 ~ 49484767 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other upstream 24595 49494727 ~ 49498630 (-)
G48506 NA other upstream 249633 49719765 ~ 49721526 (-)
AMCG00014033 NA other upstream 251614 49721746 ~ 49724237 (-)
G48510 NA other upstream 258372 49728504 ~ 49729055 (-)

Expression


Co-expression Network