AMCG00014013


Basic Information

Item Value
gene id AMCG00014013
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49588177 ~ 49594866 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014013
ATGACAGGGGCCCAAAAGGGAGTGTTGTGCGACCACATCCACATCATTAGCCCAGCCCCTCTGCAGCCTGGGAGCCGCCCCATGACACAACTATCAGGCAGCACTGAGCCACATCCTGTCGCTCAGCCGCCCTGCTCTGACACACTGTGGAcccacagcacacaacacacaacacagcgcacaacacacaacacagcgcTCACAGCACCGACTGCCGAGGCTCAGACACCAGAGAGACGTCGCGCTGTCCAGGGAGAGAACCACACTGTCACAATGTCCCAGACCTGCCTGAACTGCCTGAAGTACACGCTGTGTGTCTTCAACTTCATCTGCTGGCTGTGTGGCGTCTGTGTGATGGGGTTCGCCATCTACCTCATGACAACCTCCACGTATGCGTCTCTGGTACCCTCGTTGTCCTCCCTTAACGTGGCCAACGTGCTGATCATCGCTGGCACCATCGTCACCTGCGTGTCCTTCCTGGGCTTCCTGGGCGCCCTCCGGGAGAACCGCTGCCTGCTGATCTCGATCGACCTGTTCCTTGAGAAGGAACTGAAGCAGAGCCTTAACCAGGCAAAGCACAACGCCACCAGCGACTGGGACAACGTCCAGCGCCTGCTCCATTGCTGTGGCATCCATAATAGTTCTGACTGGAGAAATAATTCCCGACTCCACTTCCCCAATTCCTGCTGCAAAAATGACTGCACTAGCAACCCTCCGGACATCTGGCCAGAGGACCACCAGTGTGGGGCAGCGAGAGGGAGCAGCATGTCCGAGTGGGATGTGCTGACCCCTGTGCTGGCATGGCAGTGTGGTGCTGATGGTACCTTATGGCAGCATGAGCAGAATGCGGAGCACCAGGGGGCTCCCGAGGGCTGCTACACCAAGCTGAAGGACTGGTTTGAGAAGAACTTCCTGAACGTGGGTGTGGGCGTGATCATCCTGTGCATCATTGAGGTCCTGGGAATGTGCTTCAGCATGACCCTGTTCTGCCACATCAGCCGCTCCGGCCTGGGCTTCAAATGAGAAGGAAGGAGGCTCTGACACAGCTGACGCTCAGGATACCCCAGACCCTCTGAGATGCACTGAGAACTCAGCCCggccccagtgtgtgtgtggagctcAGCCCaagagtgtgcatgtgtgtacgtgagtgtgagtgtgtgcgtgtgcatgtgtgtgtgcatgagtgtgagtTTGTGCATGCGTGTGTCTCTGGATGCACTGCTCTCTTCCCACAGGGTGAAAGGGGAAGTGGTTGTGTGTGCAGAGACCCTGAAAACGACTTATAAAAAAATCCAGAAGCAGCATTATTAATGCAAGAttattgtgtctgtttgtttttcacatgatCTCGTGTGTCAGATGTGACTGTATGTgtacagatattttattttctctctggttATTTATCTGCTGGAAATGTTCTGAGATGCCGGTGCGCCCATGCTCTCTGCCAGTGCCTGTGAGATCACTGGTTTGTCATGAAGGGCAACGCGGTGTCATGTGACTGGGGGAATCGCTGTGTTTGACACTTGAGCACAATGCAGCCAGTCCAAACAGACTCCTGGCAGACTGGCGCTGAACCCGGGCAACCTCCACAGGGCATGTGGCACAGATATGCAGTCAGTCAGGGAACTCACTCGGTCAGTGCCCCCTGATAGTGCGAACGCATTCGAAACGTGTGCTGAGCTGTTACTCTTTTGTACAAGGGGGGCGTCCCCTCCGACAGCCTGTACTTGTCCTTAGcattatatatagagatataagatatatatatgCGTGTCTTGGAGGTGAAGATGTTGAAGTGGCGATGAGGCCGGACATATTGGGGAAGGACGAGTCGGACACAGGCTACAGACGCTGTGCAAGGGATCCTAATGGACAAGTGACCAGGAGGAAGAgcatgggagagagggagcaacaCTGACTGATGACGATGATCTATCTatcgatctatctatctatattcaTTGATGTGAATTGGCATGTAACACATGCAACATGTAACATGTATATACAGGCAAACCAAACTGACTTGTGTTAGCACTAATACTGATTATACAACAGCAACTCctattattaaatcaaaagcTATTCATTCATTAAGCACATGAATGCAGAACAGGAGGCGGAGAGAAGGAGCGAGTGAGACGGGGCGCCTCCCAGCACACAGAACCAGAACTCTCTGGGCTCCATGTAGAACCAAGACCAGACCCCAGGGGACAGGGAAGGGCAGGTCAGCACAGACCTGATCCTGGGAGGGTCACAGCCTCAGAGCAGACTATGCGGTGTTGGGGGGGTTTAAGACTGGTGGAAGTAAATCTATTTATTGTAGTTCTGCAGCAAATGAGCGAAACTTGTGAATCTGTACAGCTGTCACGCTAGCGTCCATTCTGCTTTAAAACTGTT

Function

GO: NA

KEGG:

id description
K06489 CD53, MOX44, TSPAN25; CD53 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014013 True 2409 mRNA 0.53 10 49588177 49594866

Neighbor

gene id symbol gene type direction distance location
AMCG00014015 NA coding upstream 1355 49570201 ~ 49586822 (+)
AMCG00014022 NA coding upstream 19078 49564964 ~ 49569099 (+)
AMCG00014009 NA coding upstream 31336 49552159 ~ 49556841 (+)
AMCG00014004 NA coding upstream 139426 49441384 ~ 49448751 (+)
AMCG00014005 LOC108246070,LOC106532244,LOC100709513 coding upstream 168280 49413955 ~ 49419897 (+)
AMCG00014016 NA coding downstream 15491 49610357 ~ 49613183 (+)
AMCG00014017 LOC103467055 coding downstream 25767 49620633 ~ 49627765 (+)
AMCG00014025 celsr2 coding downstream 34943 49629809 ~ 49633867 (+)
AMCG00014020 NA coding downstream 52932 49647798 ~ 49653162 (+)
AMCG00014018 celsr2,LOC106565652 coding downstream 58782 49653648 ~ 49673751 (+)
G48372 NA non-coding upstream 103218 49484489 ~ 49484959 (+)
G48354 NA non-coding upstream 131479 49453984 ~ 49456698 (+)
G48353 NA non-coding upstream 134305 49453033 ~ 49453872 (+)
G48243 NA non-coding upstream 476094 49068105 ~ 49112083 (+)
G48236 NA non-coding upstream 537879 49027168 ~ 49050298 (+)
G48449 NA non-coding downstream 84631 49679497 ~ 49679876 (+)
G48460 NA non-coding downstream 134805 49729671 ~ 49731800 (+)
G48467 NA non-coding downstream 158718 49753584 ~ 49754027 (+)
G48479 NA non-coding downstream 198340 49793206 ~ 49793650 (+)
G48552 NA non-coding downstream 262614 49857480 ~ 49857687 (+)
AMCG00014010 srsf3,LOC103385776,LOC105933254,LOC105017130 other upstream 42842 49538054 ~ 49545335 (+)
AMCG00013996 NA other upstream 239576 49345097 ~ 49348601 (+)
G48231 NA other upstream 487719 49076742 ~ 49100458 (+)
G48235 LOC105889183 other upstream 492631 49014629 ~ 49095546 (+)
AMCG00013985 NA other upstream 759202 48821250 ~ 48828975 (+)
AMCG00014021 NA other downstream 18835 49613701 ~ 49620027 (+)
G48451 NA other downstream 94806 49689672 ~ 49692361 (+)
G48453 NA other downstream 103754 49698620 ~ 49699622 (+)
G48454 NA other downstream 106385 49701251 ~ 49701943 (+)
G48455 NA other downstream 108212 49703078 ~ 49703528 (+)

Expression


Co-expression Network