AMCG00014015


Basic Information

Item Value
gene id AMCG00014015
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49570201 ~ 49586822 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014015
ATGAAGGATGAGGGAGAAGTAGAGCCAGTGTGGGAGATAGAGGGGAGTAGAGAGGCGGCTGAGTACACCCGCCACGTTCACTTCCTGGACCAATCAGACAGCTCTGCCCCCCAGGAGGCCGAGGACACCACTCCTCTAGCCCAGCCCCACCAATCAGAGGAGGAGAGCGGAGCCGCCCACTTTGcccagaggaagaggaagctgGGCTCGACACGCCGGGGCCTGAGGGGCcgacacagagaggcagagagagaggaggaccTGGAGCAgctgggggaggagagaggagagggaggaggggaaagCGGGAATGAGAgaaaggagggagggatgaGGGCAGAGGGTGAAGAAGAGCTAGGCAGAGGAAAGAGAGCGCAGGTCCTTGGGAAGCCAGTACTGGAGAGGGGAGAAGAACGAGGgctggagggagagaaggaggaggaagaggagaagaggCAGAAGGCAGAGATTTCCTCCCTCAGCTCCCTTCCCTCGGCTCAGGGTGACGTTCTCGGTGAAGTGCCACATTCAGCCCAGGAGGAGGCACATCAGCAGGAGCCCCCGGCCCCCACAGGCAGGCGGAAGAAGATGGGATCAAGCCGCCGGGGCCGTCTGGGAGGCggcagggggggcagggggctggGGCAGATCGGAGAGGTGAGGGGCGAGGGGCAGGCCGACATCTCAGACATcctgcagaggatccaggaggtCTTCCGCAGCTGGGACCACGAGGAGAAGGGCTTCATCACCCGGGAGGACATGCAGgggctGGGTGGAGAGCTCGGCCTCAGTGCCGGGGAGCTGCAAATGGTGTTCGACGGGCTGGACAGAGACGGAGACGGACTGGTCACTCGGCAGGACTTCACCGTGGGCATGCGCAAGTTCCTGGGATCCCAGCAGACAAAGCCCAGTGTGTACCAATCACAGGGCTGCGTGGTGCCAGAGGACGTGGACGATGAAGAGAGGCAGCACTTCCTGATCATGATGGACAGCCTGGGGGCCCACAGCCTGCTGCAGGACCAATCTGAGATCTGGAAGCTGTGGGCGGAGCTTCGGCAAAACGAGCCCCATCTCCTTGGCAACCTGGAAGAGTTTGTCTCCAAGGTGACGGACCAGATCCGAGCGGCGCAGCGGGAGAAGGAGACCCTGGAGCGGACGCTGCAAAAGAAGAGCCACTCCCAGAGGGCCGAGCTGGAGAGAGCGCTGGACAAGAAGAACGCCGAGGTGCAGGGTCTCGTCATGGTGCAGAACGAGctgGAGGACAGTGTGCTACAGCTGCGCAGTCAGCAGCGGCAGACGAGCTGTGAGAACGAGGAGCTGCGCAGGACGAACCGCGAGCTTGAGGCGCAGCTGGAGAGGATCAGAGCACAGCTGCAGGAGGCACAGAGCCGCATGCAGGACCTGCGCAGCACCATGATGGCCCGCAGACACGGACTGCCACAAGACGCAGGACCGGCCCCCAGGGACCCCGCAGACCCCTCCAGTGCAGAGAGCCAGGCGGGCCAGCGACTCGAGGCGGAGGTGCTgtgggaggaagaggagaagctGGCGAGGGAGCAGAACCCGTGGACACCCCCGCTCCGCAGCCGGGAGCGCCTGTACAACGTGGTGCTGGTGGGGAGCAGCAGCGTTGGCAAGACATCCTTCCTGCGGAGGTTCCAGAGTGGGGTGTTCAGCGCTGACCATGGGGCCACCATCGggctGGACAGCTGTATCCAGACTCTCACTCTGGGTGGGGGTCAGGTGCTCCTTCAGCTGTGGGACACCGCTGGACAAGAAAGGTTCCACAGCATCACTAAACAGGTCCTGCGCAAGGCTGACGGACTGGTGGTCATGTACGATGTTGGCTCCGCCCACTCCTTTGCTGAGGTCCGCTATTGGGTCACCTGTATCCAGGAAGGAACCTCCGATGATGTCGTAATTCTGTTGCTGGGCAACAAGAGTGACAGCACCACTAAACGGGAAGTCCCGCCCGAGGAAGGGGAGCGGCTTGCCAGGGAGTACAGGGTGCAGTTCCTGGAGTGCAGCGCGGCGTCGGGACACAACGTGACTGAAGCCATGACCGTCCTGGCCAGGATGTTGTGCGACCGGGAGGAGGCAGGACACGATGACATGGTGACGCTGAAGGAGCCACCAAGGAAGAAGAAGGGCTGCTGTTAGCGCTCCACACGGTCCTGCAGCGGACAGACGGACGAGCTCCTGAACGCCTCAGGAGTGACACAGAGTGACCGGCCACCGCTCCTCTATGACACTCGTGATGCCCCCCCGCAGAGACGCACTGCGGCTGTGTGTCTCACTGCTGAGCGTTGGCAGGTCCTCACACACAGAGCTGTGCAGAAAACCCCATTACTTTATTAcagatacagtatatatgtgtgcTCATCTTTTCTCTGCTTGCCCTCGAGCTCTTGtttataaagcaaataaagataataatgtTC

Function

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014015 True 2444 mRNA 0.62 14 49570201 49586822

Neighbor

gene id symbol gene type direction distance location
AMCG00014022 NA coding upstream 1102 49564964 ~ 49569099 (+)
AMCG00014009 NA coding upstream 13360 49552159 ~ 49556841 (+)
AMCG00014004 NA coding upstream 121450 49441384 ~ 49448751 (+)
AMCG00014005 LOC108246070,LOC106532244,LOC100709513 coding upstream 150304 49413955 ~ 49419897 (+)
AMCG00013993 NA coding upstream 613336 48939062 ~ 48956865 (+)
AMCG00014013 NA coding downstream 1355 49588177 ~ 49594866 (+)
AMCG00014016 NA coding downstream 23535 49610357 ~ 49613183 (+)
AMCG00014017 LOC103467055 coding downstream 33811 49620633 ~ 49627765 (+)
AMCG00014025 celsr2 coding downstream 42987 49629809 ~ 49633867 (+)
AMCG00014020 NA coding downstream 60976 49647798 ~ 49653162 (+)
G48372 NA non-coding upstream 85242 49484489 ~ 49484959 (+)
G48354 NA non-coding upstream 113503 49453984 ~ 49456698 (+)
G48353 NA non-coding upstream 116329 49453033 ~ 49453872 (+)
G48243 NA non-coding upstream 458118 49068105 ~ 49112083 (+)
G48236 NA non-coding upstream 519903 49027168 ~ 49050298 (+)
G48449 NA non-coding downstream 92675 49679497 ~ 49679876 (+)
G48460 NA non-coding downstream 142849 49729671 ~ 49731800 (+)
G48467 NA non-coding downstream 166762 49753584 ~ 49754027 (+)
G48479 NA non-coding downstream 206384 49793206 ~ 49793650 (+)
G48552 NA non-coding downstream 270658 49857480 ~ 49857687 (+)
AMCG00014010 srsf3,LOC103385776,LOC105933254,LOC105017130 other upstream 24866 49538054 ~ 49545335 (+)
AMCG00013996 NA other upstream 221600 49345097 ~ 49348601 (+)
G48231 NA other upstream 469743 49076742 ~ 49100458 (+)
G48235 LOC105889183 other upstream 474655 49014629 ~ 49095546 (+)
AMCG00013985 NA other upstream 741226 48821250 ~ 48828975 (+)
AMCG00014021 NA other downstream 26879 49613701 ~ 49620027 (+)
G48451 NA other downstream 102850 49689672 ~ 49692361 (+)
G48453 NA other downstream 111798 49698620 ~ 49699622 (+)
G48454 NA other downstream 114429 49701251 ~ 49701943 (+)
G48455 NA other downstream 116256 49703078 ~ 49703528 (+)

Expression


Co-expression Network