AMCG00014016


Basic Information

Item Value
gene id AMCG00014016
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49610357 ~ 49613183 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014016
ATTTTCATTATTAACAGATGTGTCAGATGGCAGCTGTTGTCATTATTGCAGAGTCGAATGAAAGTCATGCTGCTGCTGTCAGTAGGGAAGTGAGGAAATGTTCTGATTAGTAAGCTATCTATTGTGAGTCAACAGACTCcgtgctgtctgtctgtctgtctgtcccacAGCAGGAAGACACTGAGCACTGCAGCGTGTGACTGGAGTCAATCTccgtgtctgtctctctggaGTCGAGCTGGGCTGGACGGTCAGTCAATCTCTGTGTCCGTCTCTAAGGAGCTGAGCTGGGCTGGACGGTCAGTCACTCTCCGTATCCGTTTCTCTGGAGCTGAGCTGGGCTGAGATGGGCGACCAGTCCGAGTCTCCGTGTCCATCTCTCTTCACCATGAGGGCACTACCAGCTCTGCTACTGCTGCTCAATCTACTCACAGgCGTCTCATCCCTCAGCGGTCCGGCTAAGGTGACAATGTACACCCAATCAGACTACAAGATAAACTACACCTACAACAGGAATTACTACTTCACTCACAAAAAGTACTGGTGCCAGGGCTACTACAAGCTGCACTGCAACATCCGGGCCTACGCAGGGGATGCGGTTGAGGGCAGGAACGTCATAGTAGAGGACAACAAGCAGACAGGCAGCATCACCGTCACCATTAAGAAGCCCCAGCTCTCCGACGCCGGCGACTACTGGTGTGGCATCGAGAAGACCGCCCTGCTGGACGTCATGACGTACACCCGAGTGGAGGTCATGCAAGGTTCTGCACCCCAGGACAgGGTGAAGCCCCCTGTGCACTACATCGTGCCGTTCAGCTTGCTGGGGCTGCTGGTCGTCCTAGTGCCGTTGGCGGGCGTGGAGCCGGACGGCGGTGTGACGTATGCCGAGGTGAAGGGGGTGCAGTTGACCTCTCTGTCCCCAGGACGACCCCCATCCGCCAGGGAACCGGACGGGCCGGACAACACACAACTGCACTACAGCGACATCCAGCTGCTGTAGTGACGAGAGACCCCCTACCCCCGTGTTACAGTCTTTAAAGGAGATGTAAATGCTATTACTACCACAGCTACTAATAAACACCTGTTTCTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014016 True 1093 mRNA 0.55 5 49610357 49613183

Neighbor

gene id symbol gene type direction distance location
AMCG00014013 NA coding upstream 15491 49588177 ~ 49594866 (+)
AMCG00014015 NA coding upstream 23535 49570201 ~ 49586822 (+)
AMCG00014022 NA coding upstream 41258 49564964 ~ 49569099 (+)
AMCG00014009 NA coding upstream 53516 49552159 ~ 49556841 (+)
AMCG00014004 NA coding upstream 161606 49441384 ~ 49448751 (+)
AMCG00014017 LOC103467055 coding downstream 7450 49620633 ~ 49627765 (+)
AMCG00014025 celsr2 coding downstream 16626 49629809 ~ 49633867 (+)
AMCG00014020 NA coding downstream 34615 49647798 ~ 49653162 (+)
AMCG00014018 celsr2,LOC106565652 coding downstream 40465 49653648 ~ 49673751 (+)
AMCG00014014 ppil1,LOC107736561,LOC107667353 coding downstream 67338 49680521 ~ 49682420 (+)
G48372 NA non-coding upstream 125398 49484489 ~ 49484959 (+)
G48354 NA non-coding upstream 153659 49453984 ~ 49456698 (+)
G48353 NA non-coding upstream 156485 49453033 ~ 49453872 (+)
G48243 NA non-coding upstream 498274 49068105 ~ 49112083 (+)
G48236 NA non-coding upstream 560059 49027168 ~ 49050298 (+)
G48449 NA non-coding downstream 66314 49679497 ~ 49679876 (+)
G48460 NA non-coding downstream 116488 49729671 ~ 49731800 (+)
G48467 NA non-coding downstream 140401 49753584 ~ 49754027 (+)
G48479 NA non-coding downstream 180023 49793206 ~ 49793650 (+)
G48552 NA non-coding downstream 244297 49857480 ~ 49857687 (+)
AMCG00014010 srsf3,LOC103385776,LOC105933254,LOC105017130 other upstream 65022 49538054 ~ 49545335 (+)
AMCG00013996 NA other upstream 261756 49345097 ~ 49348601 (+)
G48231 NA other upstream 509899 49076742 ~ 49100458 (+)
G48235 LOC105889183 other upstream 514811 49014629 ~ 49095546 (+)
AMCG00013985 NA other upstream 781382 48821250 ~ 48828975 (+)
AMCG00014021 NA other downstream 518 49613701 ~ 49620027 (+)
G48451 NA other downstream 76489 49689672 ~ 49692361 (+)
G48453 NA other downstream 85437 49698620 ~ 49699622 (+)
G48454 NA other downstream 88068 49701251 ~ 49701943 (+)
G48455 NA other downstream 89895 49703078 ~ 49703528 (+)

Expression


Co-expression Network