AMCG00014020


Basic Information

Item Value
gene id AMCG00014020
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49647798 ~ 49653162 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014020
ATGCCCCCCCTCATTAGGCCCAGCTCCTCGGTCTCGGTCTCCACCTCGGGCCTCGTCTACGtgtccttctcttcctcctctctatTTTTAGCGCTAGCTGTGCCTTCACTTGTCTCTGTCGGGGATGTAGaCGGCGTGCACAGCGTGGCGGCGCAGTGCTCCCTGCAGGTCACCATCGTGACGGACGACATGCTGGCCAACAGCATCACGCTGCGGCTGGCGGACATGTGGCAGGAGCGCTTCCTGTCCCCGCTGCTGGCGCTGTTCCTGGGCGGCGTGGCAGCCGTGCTGCCCGGGGCGGTGCCCGAGGACGTGGTGGTCTTCAACATCCAGAACGACACGGACGTCAGCGGCCACATCCTGAACGTCAGCCTGTCAGTGCGCGCTGGGGGCGGGGGGCAGTTCTACAGCTCTGAGGAGCTGCAGGAGCGGCTGTACCTGAACCGCAGCCTGCTGGCACGCGTGTCCTCCCAGCGTGTGCTGCCCTTCGACGACAACATCTGCCTGCGCGAGCCGTGCGAGAACTACATGAAGTGCGTGTCCGTGCTGCGCTTCGACAGCCTGGCGCCCTTCGTCTCCTCCGACACCATCCTGTTCCGGCCCATCCACCCCATCAGTGGCCTGCGCTGCCGCTGCCCCCCCGGCTTCACCGGCGACTACTGCGAGACAGAGATCGACCTGTGCTACGCCAAGCCCTGCGGCCGCAACGGGGTCTGCCGCCGCCGCGAGGGGGGCTACACCTGCGAGTGCTTCGAGGACTTCACAGGGGAGCAGTGCCAGGTGTCCTCGCGCTCAGGCCGCTGTGGGCCGGGTCTGTGTAAGAATGGCGGCACCTGTGTCAACCTGCTGGTGGGGGGGTTCAAGTGCGACTGCCCGGCAGGGGGGTTCGAGCGGCCATTCTGCGAGATGAGCACCCGCGGCTTCCCCCCCCGCTCCTTCGTCACCTTCGGGGGTCTCCGCCAGCGCTTCCACTTCACCCTGTCGCTCACGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014020 True 993 mRNA 0.66 3 49647798 49653162

Neighbor

gene id symbol gene type direction distance location
AMCG00014025 celsr2 coding upstream 13931 49629809 ~ 49633867 (+)
AMCG00014017 LOC103467055 coding upstream 20033 49620633 ~ 49627765 (+)
AMCG00014016 NA coding upstream 34615 49610357 ~ 49613183 (+)
AMCG00014013 NA coding upstream 52932 49588177 ~ 49594866 (+)
AMCG00014015 NA coding upstream 60976 49570201 ~ 49586822 (+)
AMCG00014018 celsr2,LOC106565652 coding downstream 486 49653648 ~ 49673751 (+)
AMCG00014014 ppil1,LOC107736561,LOC107667353 coding downstream 27359 49680521 ~ 49682420 (+)
AMCG00014019 NA coding downstream 33646 49686808 ~ 49688657 (+)
AMCG00014027 NA coding downstream 42104 49695266 ~ 49697020 (+)
AMCG00014026 med20 coding downstream 50549 49703711 ~ 49706258 (+)
G48372 NA non-coding upstream 162839 49484489 ~ 49484959 (+)
G48354 NA non-coding upstream 191100 49453984 ~ 49456698 (+)
G48353 NA non-coding upstream 193926 49453033 ~ 49453872 (+)
G48243 NA non-coding upstream 535715 49068105 ~ 49112083 (+)
G48236 NA non-coding upstream 597500 49027168 ~ 49050298 (+)
G48449 NA non-coding downstream 26335 49679497 ~ 49679876 (+)
G48460 NA non-coding downstream 76509 49729671 ~ 49731800 (+)
G48467 NA non-coding downstream 100422 49753584 ~ 49754027 (+)
G48479 NA non-coding downstream 140044 49793206 ~ 49793650 (+)
G48552 NA non-coding downstream 204318 49857480 ~ 49857687 (+)
AMCG00014021 NA other upstream 27771 49613701 ~ 49620027 (+)
AMCG00014010 srsf3,LOC103385776,LOC105933254,LOC105017130 other upstream 102463 49538054 ~ 49545335 (+)
AMCG00013996 NA other upstream 299197 49345097 ~ 49348601 (+)
G48231 NA other upstream 547340 49076742 ~ 49100458 (+)
G48235 LOC105889183 other upstream 552252 49014629 ~ 49095546 (+)
G48451 NA other downstream 36510 49689672 ~ 49692361 (+)
G48453 NA other downstream 45458 49698620 ~ 49699622 (+)
G48454 NA other downstream 48089 49701251 ~ 49701943 (+)
G48455 NA other downstream 49916 49703078 ~ 49703528 (+)
AMCG00014032 usp49 other downstream 53681 49706843 ~ 49717428 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location